The 2.0 version of rSNPBase

Variant report

Variant rs61897783
Chromosome Location chr11:47151945-47151946
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47124600-47159000 Weak transcription Primary T cells from cord blood blood
2 chr11:47129400-47158000 Weak transcription Aorta Aorta
3 chr11:47129400-47158600 Weak transcription Spleen Spleen
4 chr11:47130000-47159000 Weak transcription Hela-S3 cervix
5 chr11:47131600-47155000 Weak transcription Right Atrium heart
6 chr11:47131600-47159400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:47131800-47161200 Weak transcription Brain Cingulate Gyrus brain
8 chr11:47132600-47155600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr11:47140400-47159000 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr11:47141000-47159000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr11:47141000-47159400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr11:47141000-47164600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr11:47141200-47154200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr11:47141200-47158400 Weak transcription Stomach Smooth Muscle stomach
15 chr11:47141200-47159400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr11:47143600-47164600 Weak transcription Placenta Amnion Placenta Amnion
17 chr11:47143600-47175200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr11:47144200-47159400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr11:47145200-47164800 Weak transcription Ovary ovary
20 chr11:47145200-47174800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr11:47145400-47152000 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr11:47146000-47159400 Weak transcription Colon Smooth Muscle Colon
23 chr11:47146800-47157800 Weak transcription HSMMtube muscle
24 chr11:47147000-47152000 Weak transcription K562 blood
25 chr11:47147000-47158600 Weak transcription Fetal Lung lung
26 chr11:47147000-47159200 Weak transcription Thymus Thymus
27 chr11:47147600-47152000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr11:47147600-47164200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr11:47148200-47164400 Weak transcription NHEK skin
30 chr11:47148600-47155000 Weak transcription Small Intestine intestine
31 chr11:47148800-47153000 Weak transcription Duodenum Mucosa Duodenum
32 chr11:47149000-47170400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr11:47149200-47152000 Weak transcription H9 Cell Line embryonic stem cell
34 chr11:47149400-47173200 Weak transcription Primary B cells from peripheral blood blood
35 chr11:47149600-47158600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr11:47149600-47170400 Weak transcription Esophagus oesophagus
37 chr11:47149800-47164200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr11:47150000-47158600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr11:47150000-47159200 Weak transcription Fetal Brain Female brain
40 chr11:47150200-47152200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr11:47150400-47153200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr11:47150400-47154800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr11:47150600-47152600 Enhancers Brain Angular Gyrus brain
44 chr11:47150800-47155400 Enhancers Pancreas Pancrea
45 chr11:47151000-47152000 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr11:47151000-47152800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr11:47151000-47159000 Weak transcription Brain Hippocampus Middle brain
48 chr11:47151200-47152000 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr11:47151200-47152000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr11:47151200-47152000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015