Variant report

Variant	rs61903578
Chromosome Location	chr11:59501044-59501045
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11230067	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11230085	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61903586	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752406	chr11:59490424-59529524	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59498600-59502800	Weak transcription	Fetal Kidney	kidney
2	chr11:59499400-59502000	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr11:59499400-59504400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr11:59501000-59501200	Enhancers	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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