The 2.0 version of rSNPBase

Variant report

Variant rs61921909
Chromosome Location chr12:62885489-62885490
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62861800-62902200 Weak transcription Fetal Kidney kidney
2 chr12:62862800-62895400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr12:62863200-62895200 Weak transcription Placenta Amnion Placenta Amnion
4 chr12:62863200-62896800 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr12:62863200-62901800 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr12:62863200-62937400 Weak transcription Pancreas Pancrea
7 chr12:62863400-62895400 Weak transcription Stomach Smooth Muscle stomach
8 chr12:62863400-62902000 Weak transcription HUVEC blood vessel
9 chr12:62863400-62911000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr12:62863600-62892600 Weak transcription NH-A brain
11 chr12:62863600-62926400 Weak transcription Colon Smooth Muscle Colon
12 chr12:62864000-62894400 Weak transcription Spleen Spleen
13 chr12:62864000-62899200 Weak transcription Brain Germinal Matrix brain
14 chr12:62864000-62901600 Weak transcription Lung lung
15 chr12:62864000-62901600 Weak transcription Rectal Smooth Muscle rectum
16 chr12:62864000-62906200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr12:62866000-62892000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr12:62866000-62895400 Weak transcription Left Ventricle heart
19 chr12:62866200-62887400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr12:62866200-62897000 Weak transcription K562 blood
21 chr12:62866200-62899200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr12:62866200-62906200 Weak transcription Aorta Aorta
23 chr12:62866600-62896000 Weak transcription Fetal Brain Female brain
24 chr12:62866600-62906200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr12:62866600-62912400 Weak transcription NHLF lung
26 chr12:62866600-62953200 Weak transcription Psoas Muscle Psoas
27 chr12:62866800-62888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr12:62867000-62890200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr12:62867200-62898600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr12:62869000-62892000 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr12:62869000-62904400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr12:62871000-62910800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr12:62871200-62895200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr12:62871800-62891200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr12:62871800-62891400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr12:62871800-62891400 Weak transcription Fetal Intestine Small intestine
37 chr12:62871800-62892400 Weak transcription Osteobl bone
38 chr12:62871800-62895200 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr12:62871800-62895400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr12:62871800-62897200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr12:62871800-62926200 Weak transcription Fetal Brain Male brain
42 chr12:62872000-62887800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr12:62872000-62888800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr12:62872000-62894200 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr12:62872200-62891200 Weak transcription Placenta Placenta
46 chr12:62872200-62895400 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr12:62872400-62892000 Weak transcription Adipose Nuclei Adipose
48 chr12:62872400-62892600 Weak transcription Primary T cells fromperipheralblood blood
49 chr12:62872600-62901600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr12:62873400-62895400 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015