Variant report

Variant rs61931460
Chromosome Location chr12:40340097-40340098
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:40334000-40343000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr12:40334200-40343600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr12:40337400-40350600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr12:40337800-40341000 Strong transcription Cortex derived primary cultured neurospheres brain
5 chr12:40338000-40366000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr12:40338400-40340200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr12:40338600-40340200 Weak transcription Fetal Intestine Large intestine
8 chr12:40338600-40346600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr12:40339200-40341600 Weak transcription Stomach Smooth Muscle stomach
10 chr12:40339800-40340200 ZNF genes & repeats Lung lung
11 chr12:40339800-40340400 ZNF genes & repeats Fetal Stomach stomach
12 chr12:40339800-40340600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr12:40339800-40340800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr12:40339800-40340800 Enhancers HMEC breast
15 chr12:40340000-40340400 Enhancers NHEK skin
16 chr12:40340000-40340600 Strong transcription Ovary ovary
17 chr12:40340000-40340800 ZNF genes & repeats Fetal Intestine Small intestine
18 chr12:40340000-40341000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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