The 2.0 version of rSNPBase

Variant report

Variant rs61937641
Chromosome Location chr12:104463908-104463909
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104459200-104480600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:104459200-104480600 Weak transcription Esophagus oesophagus
3 chr12:104459400-104464000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr12:104459400-104476600 Weak transcription Fetal Kidney kidney
5 chr12:104459600-104464000 Weak transcription Primary B cells from peripheral blood blood
6 chr12:104459600-104476600 Weak transcription Primary hematopoietic stem cells blood
7 chr12:104459600-104476600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr12:104459600-104481200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr12:104459800-104465000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:104459800-104465800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr12:104459800-104476600 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr12:104459800-104476800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr12:104459800-104477400 Weak transcription Gastric stomach
14 chr12:104459800-104477600 Weak transcription Small Intestine intestine
15 chr12:104459800-104477800 Weak transcription Spleen Spleen
16 chr12:104459800-104491800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr12:104460000-104464800 Weak transcription A549 lung
18 chr12:104460000-104464800 Weak transcription HMEC breast
19 chr12:104460000-104465000 Weak transcription Ovary ovary
20 chr12:104460000-104465000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr12:104460000-104465000 Weak transcription GM12878-XiMat blood
22 chr12:104460000-104468400 Strong transcription Fetal Lung lung
23 chr12:104460000-104476000 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr12:104460000-104476600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr12:104460000-104476600 Weak transcription Brain Cingulate Gyrus brain
26 chr12:104460000-104476600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr12:104460000-104476800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr12:104460000-104477600 Weak transcription Aorta Aorta
29 chr12:104460000-104482000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr12:104460000-104496800 Weak transcription HepG2 liver
31 chr12:104460000-104511800 Weak transcription Hela-S3 cervix
32 chr12:104460000-104526200 Weak transcription Colonic Mucosa Colon
33 chr12:104460200-104464800 Weak transcription Brain Anterior Caudate brain
34 chr12:104460200-104465000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr12:104460200-104468200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr12:104460200-104472600 Weak transcription Fetal Heart heart
37 chr12:104460200-104476600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr12:104460200-104476600 Weak transcription NHEK skin
39 chr12:104460400-104464200 Weak transcription Muscle Satellite Cultured Cells --
40 chr12:104460400-104468400 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr12:104460600-104464000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr12:104460600-104464000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr12:104460600-104466000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr12:104460600-104466600 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr12:104460600-104468200 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr12:104460600-104469200 Weak transcription Psoas Muscle Psoas
47 chr12:104460600-104469400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr12:104460600-104469600 Strong transcription Fetal Muscle Leg muscle
49 chr12:104460600-104476600 Weak transcription Brain Angular Gyrus brain
50 chr12:104460600-104480600 Weak transcription K562 blood

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Last update: Aug 31, 2015