The 2.0 version of rSNPBase

Variant report

Variant rs61939187
Chromosome Location chr12:104505529-104505530
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104460000-104511800 Weak transcription Hela-S3 cervix
2 chr12:104460000-104526200 Weak transcription Colonic Mucosa Colon
3 chr12:104477200-104508400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr12:104480000-104508400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr12:104482800-104508200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr12:104491000-104508600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr12:104492000-104512400 Weak transcription HMEC breast
8 chr12:104493200-104512400 Weak transcription Rectal Smooth Muscle rectum
9 chr12:104493200-104514400 Weak transcription NHEK skin
10 chr12:104493400-104511800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr12:104493400-104513400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr12:104493400-104514400 Weak transcription Brain Substantia Nigra brain
13 chr12:104493400-104519200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr12:104493400-104519800 Weak transcription Placenta Amnion Placenta Amnion
15 chr12:104493600-104510800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr12:104493600-104517400 Weak transcription Right Ventricle heart
17 chr12:104493800-104515400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr12:104493800-104518400 Weak transcription Gastric stomach
19 chr12:104493800-104530600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr12:104494200-104509200 Weak transcription Fetal Brain Male brain
21 chr12:104494400-104508000 Weak transcription GM12878-XiMat blood
22 chr12:104494400-104513600 Weak transcription Brain Germinal Matrix brain
23 chr12:104494400-104514000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr12:104494400-104516200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:104494400-104516200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr12:104494400-104521000 Weak transcription Lung lung
27 chr12:104494400-104521200 Weak transcription Aorta Aorta
28 chr12:104494400-104522600 Weak transcription Spleen Spleen
29 chr12:104494600-104516000 Weak transcription Fetal Stomach stomach
30 chr12:104494800-104508400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr12:104494800-104509000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:104494800-104509200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr12:104495400-104506400 Weak transcription Fetal Intestine Small intestine
34 chr12:104495600-104508400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr12:104495600-104508400 Weak transcription Fetal Intestine Large intestine
36 chr12:104495600-104509000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr12:104495600-104510800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr12:104495600-104514200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr12:104495600-104530800 Weak transcription Esophagus oesophagus
40 chr12:104495800-104508200 Weak transcription Primary T cells fromperipheralblood blood
41 chr12:104496000-104508400 Weak transcription Muscle Satellite Cultured Cells --
42 chr12:104497000-104506800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr12:104497000-104508200 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr12:104497000-104508600 Weak transcription HUVEC blood vessel
45 chr12:104497000-104509600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr12:104497000-104514200 Weak transcription NHLF lung
47 chr12:104497000-104516000 Weak transcription Ovary ovary
48 chr12:104497000-104516200 Weak transcription Left Ventricle heart
49 chr12:104497000-104524600 Weak transcription Pancreas Pancrea
50 chr12:104497200-104508200 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015