Variant report
| Variant | rs61964063 |
|---|---|
| Chromosome Location | chr13:95111798-95111799 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:30)
| rs_ID | r2[population] |
|---|---|
| rs1028806 | 1.00[ASN][1000 genomes] |
| rs11551042 | 1.00[ASN][1000 genomes] |
| rs11616807 | 1.00[ASN][1000 genomes] |
| rs11618471 | 1.00[ASN][1000 genomes] |
| rs12864325 | 1.00[ASN][1000 genomes] |
| rs12876569 | 1.00[ASN][1000 genomes] |
| rs12877849 | 1.00[ASN][1000 genomes] |
| rs16949823 | 1.00[ASN][1000 genomes] |
| rs16949829 | 1.00[ASN][1000 genomes] |
| rs16949834 | 1.00[ASN][1000 genomes] |
| rs16949864 | 1.00[ASN][1000 genomes] |
| rs2031527 | 1.00[ASN][1000 genomes] |
| rs41495446 | 1.00[ASN][1000 genomes] |
| rs4255654 | 1.00[ASN][1000 genomes] |
| rs4773794 | 1.00[ASN][1000 genomes] |
| rs4773795 | 1.00[ASN][1000 genomes] |
| rs4773796 | 1.00[ASN][1000 genomes] |
| rs61962247 | 1.00[ASN][1000 genomes] |
| rs61962248 | 1.00[ASN][1000 genomes] |
| rs61962249 | 1.00[ASN][1000 genomes] |
| rs61962250 | 1.00[ASN][1000 genomes] |
| rs61964062 | 1.00[ASN][1000 genomes] |
| rs61964064 | 1.00[ASN][1000 genomes] |
| rs61964065 | 1.00[ASN][1000 genomes] |
| rs61964066 | 1.00[ASN][1000 genomes] |
| rs61964067 | 1.00[ASN][1000 genomes] |
| rs61964068 | 1.00[ASN][1000 genomes] |
| rs61964072 | 1.00[ASN][1000 genomes] |
| rs67968378 | 1.00[ASN][1000 genomes] |
| rs9670775 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv34004 | chr13:94906537-95392644 | Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 27 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:95106000-95119800 | Genic enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 2 | chr13:95110800-95116400 | Strong transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
