The 2.0 version of rSNPBase

Variant report

Variant rs61975408
Chromosome Location chr14:55568310-55568311
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55557800-55568600 Weak transcription Fetal Heart heart
2 chr14:55559200-55569000 Weak transcription Esophagus oesophagus
3 chr14:55560600-55569200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr14:55561800-55568400 Weak transcription HMEC breast
5 chr14:55561800-55568800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr14:55562000-55568800 Weak transcription HSMM muscle
7 chr14:55564000-55569000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr14:55564000-55569200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr14:55564000-55570200 Enhancers Stomach Mucosa stomach
10 chr14:55564200-55568400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr14:55564200-55568400 Weak transcription Gastric stomach
12 chr14:55564200-55568800 Weak transcription H1 Cell Line embryonic stem cell
13 chr14:55564200-55569000 Enhancers Fetal Intestine Small intestine
14 chr14:55564400-55569800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr14:55564800-55568600 Weak transcription Brain Angular Gyrus brain
16 chr14:55565000-55568600 Weak transcription Colon Smooth Muscle Colon
17 chr14:55565000-55568600 Weak transcription A549 lung
18 chr14:55565000-55568800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr14:55565200-55568600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr14:55565200-55568600 Weak transcription Brain Substantia Nigra brain
21 chr14:55565200-55569000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr14:55565200-55569000 Weak transcription Brain Anterior Caudate brain
23 chr14:55565200-55570600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr14:55565400-55568400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr14:55565400-55568600 Weak transcription Brain Hippocampus Middle brain
26 chr14:55565400-55568600 Weak transcription NH-A brain
27 chr14:55565400-55568800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr14:55565400-55568800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr14:55565400-55568800 Weak transcription K562 blood
30 chr14:55565400-55569000 Weak transcription Brain Cingulate Gyrus brain
31 chr14:55565600-55568600 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr14:55565600-55568600 Weak transcription Placenta Amnion Placenta Amnion
33 chr14:55565600-55568600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr14:55565600-55568600 Weak transcription Spleen Spleen
35 chr14:55565800-55568400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr14:55565800-55568600 Weak transcription Primary B cells from peripheral blood blood
37 chr14:55565800-55568600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr14:55565800-55568600 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr14:55565800-55568600 Weak transcription Psoas Muscle Psoas
40 chr14:55565800-55568800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr14:55566000-55568800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr14:55566200-55569200 Enhancers NHDF-Ad bronchial
43 chr14:55566400-55568800 Enhancers Hela-S3 cervix
44 chr14:55566400-55568800 Enhancers NHEK skin
45 chr14:55566400-55569800 Enhancers Adipose Nuclei Adipose
46 chr14:55566400-55570600 Enhancers Fetal Lung lung
47 chr14:55566400-55570800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr14:55566400-55570800 Enhancers Cortex derived primary cultured neurospheres brain
49 chr14:55566600-55568400 Weak transcription Duodenum Mucosa Duodenum
50 chr14:55566600-55569400 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015