Variant report

Variant rs61978561
Chromosome Location chr6:32052363-32052364
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32015200-32052600 Weak transcription Brain Angular Gyrus brain
2 chr6:32038200-32055000 Weak transcription Left Ventricle heart
3 chr6:32041400-32054200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:32044000-32053400 Weak transcription Fetal Intestine Large intestine
5 chr6:32045200-32053600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:32046600-32053000 Strong transcription Fetal Intestine Small intestine
7 chr6:32046800-32054200 Genic enhancers Fetal Muscle Trunk muscle
8 chr6:32048800-32052400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr6:32049000-32052600 Weak transcription Brain Hippocampus Middle brain
10 chr6:32049400-32053000 Weak transcription Brain Cingulate Gyrus brain
11 chr6:32049400-32059600 Weak transcription Aorta Aorta
12 chr6:32049600-32053600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr6:32049800-32052400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:32049800-32052400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr6:32050000-32053000 Strong transcription Fetal Stomach stomach
16 chr6:32050400-32052400 Weak transcription Brain Substantia Nigra brain
17 chr6:32050400-32053400 Weak transcription Colon Smooth Muscle Colon
18 chr6:32050400-32053600 Weak transcription Colonic Mucosa Colon
19 chr6:32050800-32052400 Strong transcription Ovary ovary
20 chr6:32050800-32055000 Weak transcription Right Atrium heart
21 chr6:32051000-32052600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr6:32051000-32053000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
23 chr6:32051000-32053200 Weak transcription Rectal Smooth Muscle rectum
24 chr6:32051200-32052800 Weak transcription Gastric stomach
25 chr6:32051200-32053200 Weak transcription Duodenum Mucosa Duodenum
26 chr6:32051200-32054200 Weak transcription Pancreas Pancrea
27 chr6:32051400-32052600 Enhancers Hela-S3 cervix
28 chr6:32051400-32052800 Strong transcription Stomach Smooth Muscle stomach
29 chr6:32051400-32053600 Weak transcription NHLF lung
30 chr6:32051400-32054000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr6:32051400-32054000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr6:32051400-32054200 Weak transcription Esophagus oesophagus
33 chr6:32051600-32054000 Enhancers Placenta Amnion Placenta Amnion
34 chr6:32051800-32053000 Strong transcription Brain Anterior Caudate brain
35 chr6:32052000-32052800 Strong transcription Lung lung
36 chr6:32052000-32053000 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
37 chr6:32052000-32053000 Strong transcription Spleen Spleen
38 chr6:32052000-32053200 Strong transcription Adipose Nuclei Adipose
39 chr6:32052000-32054400 Weak transcription Right Ventricle heart
40 chr6:32052200-32054000 Weak transcription NHDF-Ad bronchial
41 chr6:32052200-32054200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:32052200-32054400 Strong transcription Fetal Muscle Leg muscle
43 chr6:32052200-32056400 Bivalent Enhancer Placenta Placenta

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