Variant report

Variant	rs61982667
Chromosome Location	chr14:83948184-83948185
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10498561	1.00[ASN][1000 genomes]
rs17118600	1.00[ASN][1000 genomes]
rs17118618	1.00[ASN][1000 genomes]
rs17118624	1.00[ASN][1000 genomes]
rs17118631	1.00[ASN][1000 genomes]
rs17118632	1.00[ASN][1000 genomes]
rs17118685	1.00[ASN][1000 genomes]
rs17118691	1.00[ASN][1000 genomes]
rs17118712	1.00[ASN][1000 genomes]
rs17118719	1.00[ASN][1000 genomes]
rs17118722	1.00[ASN][1000 genomes]
rs17693327	1.00[ASN][1000 genomes]
rs17693428	1.00[ASN][1000 genomes]
rs17693512	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17693524	1.00[ASN][1000 genomes]
rs2046435	1.00[ASN][1000 genomes]
rs61982662	1.00[ASN][1000 genomes]
rs61982663	1.00[ASN][1000 genomes]
rs61982666	1.00[ASN][1000 genomes]
rs61984865	1.00[ASN][1000 genomes]
rs61984866	1.00[ASN][1000 genomes]
rs61984867	1.00[ASN][1000 genomes]
rs61984908	1.00[ASN][1000 genomes]
rs61984909	1.00[ASN][1000 genomes]
rs61984911	1.00[ASN][1000 genomes]
rs61984912	1.00[ASN][1000 genomes]
rs61984913	1.00[ASN][1000 genomes]
rs61984914	1.00[ASN][1000 genomes]
rs61984915	1.00[ASN][1000 genomes]
rs61984916	1.00[ASN][1000 genomes]
rs61984917	1.00[ASN][1000 genomes]
rs61984918	1.00[ASN][1000 genomes]
rs61984921	1.00[ASN][1000 genomes]
rs7152220	1.00[ASN][1000 genomes]
rs7157337	1.00[ASN][1000 genomes]
rs74071039	1.00[ASN][1000 genomes]
rs8012021	1.00[ASN][1000 genomes]
rs8019486	1.00[ASN][1000 genomes]
rs8021074	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046869	chr14:83749048-84284813	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv542152	chr14:83749048-84284813	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv902154	chr14:83792205-84023013	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1039276	chr14:83814378-84232588	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1051153	chr14:83839382-84099803	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv542153	chr14:83839382-84099803	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv565372	chr14:83871553-83969918	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
8	nsv832843	chr14:83891733-84038073	ZNF genes & repeats Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv2754515	chr14:83931527-83962925	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:83946000-83949400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr14:83946000-83949400	Weak transcription	Aorta	Aorta
3	chr14:83947800-83949400	Weak transcription	Fetal Heart	heart
4	chr14:83948000-83949000	Enhancers	Fetal Stomach	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links