Variant report

Variant	rs61985080
Chromosome Location	chr14:69368209-69368210
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69358005..69360954-chr14:69365847..69368420,3	MCF-7	breast:
2	chr14:69366379..69368743-chr14:69454832..69457651,2	MCF-7	breast:
3	chr14:69364211..69367426-chr14:69367828..69370926,4	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11158771	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158772	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158773	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158774	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11620768	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621414	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621869	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11623410	1.00[ASN][1000 genomes]
rs11625353	1.00[ASN][1000 genomes]
rs11625822	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626631	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626859	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628692	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12185057	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899267	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57653482	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58940034	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59072646	1.00[ASN][1000 genomes]
rs59382480	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985075	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985076	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985077	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985078	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985079	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985081	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985082	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61985083	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72733522	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69336400-69378200	Strong transcription	Primary T cells from cord blood	blood
2	chr14:69337400-69404400	Weak transcription	Fetal Brain Male	brain
3	chr14:69337800-69379200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr14:69337800-69380600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
5	chr14:69338000-69378800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr14:69338200-69375000	Strong transcription	Placenta Amnion	Placenta Amnion
7	chr14:69338200-69378200	Strong transcription	HUES64 Cell Line	embryonic stem cell
8	chr14:69338400-69377800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr14:69338600-69370600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr14:69339200-69394600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr14:69341800-69378400	Strong transcription	Fetal Intestine Small	intestine
12	chr14:69341800-69380400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr14:69342000-69378200	Strong transcription	Primary T helper cells fromperipheralblood	blood
14	chr14:69342200-69378200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
15	chr14:69345800-69394800	Weak transcription	Small Intestine	intestine
16	chr14:69346800-69379800	Strong transcription	Fetal Intestine Large	intestine
17	chr14:69348200-69389200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr14:69348600-69375200	Weak transcription	K562	blood
19	chr14:69353000-69371600	Weak transcription	Brain Hippocampus Middle	brain
20	chr14:69354000-69393200	Strong transcription	NHEK	skin
21	chr14:69354400-69378600	Strong transcription	HUES6 Cell Line	embryonic stem cell
22	chr14:69354600-69371800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr14:69354600-69379000	Strong transcription	H1 Cell Line	embryonic stem cell
24	chr14:69354600-69379000	Strong transcription	HUES48 Cell Line	embryonic stem cell
25	chr14:69354600-69393000	Strong transcription	Dnd41	blood
26	chr14:69355800-69378200	Strong transcription	Cortex derived primary cultured neurospheres	brain
27	chr14:69357000-69371800	Weak transcription	Brain Cingulate Gyrus	brain
28	chr14:69357000-69375400	Weak transcription	Brain Substantia Nigra	brain
29	chr14:69357800-69373400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr14:69358200-69379200	Strong transcription	HepG2	liver
31	chr14:69360400-69378600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
32	chr14:69360600-69388800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr14:69360800-69368600	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr14:69361200-69375200	Weak transcription	Brain Germinal Matrix	brain
35	chr14:69361600-69378200	Strong transcription	Adipose Nuclei	Adipose
36	chr14:69361600-69378600	Weak transcription	Fetal Heart	heart
37	chr14:69362000-69378600	Weak transcription	Right Atrium	heart
38	chr14:69362000-69378800	Strong transcription	iPS-15b Cell Line	embryonic stem cell
39	chr14:69362000-69380400	Strong transcription	NHDF-Ad	bronchial
40	chr14:69362200-69377400	Strong transcription	Aorta	Aorta
41	chr14:69362600-69378600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
42	chr14:69362600-69389200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr14:69362600-69393400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr14:69363000-69369800	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr14:69363200-69371000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr14:69363200-69379400	Strong transcription	Muscle Satellite Cultured Cells	--
47	chr14:69364000-69376400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr14:69364200-69371600	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr14:69364200-69372200	Strong transcription	Right Ventricle	heart
50	chr14:69364200-69377800	Strong transcription	Fetal Muscle Leg	muscle

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