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Variant report
Variant
rs61987410
Chromosome Location
chr14:65583532-65583533
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:3)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:3 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr14:65567460..65569268-chr14:65582296..65583895,2
K562
blood:
2
chr14:65568779..65571634-chr14:65582917..65585589,3
MCF-7
breast:
3
chr14:65583338..65585299-chr14:65708352..65712057,3
MCF-7
breast:
No data
No data
No data
Variant related genes
Relation type
ENSG00000125952
Chromatin interaction
Extended variants information (count: 2 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:1)
rs_ID
r
2
[population]
rs12590628
1.00[AFR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv832816
chr14:65473244-65644645
Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
19 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links