The 2.0 version of rSNPBase

Variant report

Variant rs62010907
Chromosome Location chr15:49278090-49278091
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49268600-49279400 Weak transcription HSMM muscle
2 chr15:49268600-49282000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr15:49268600-49282600 Weak transcription Right Ventricle heart
4 chr15:49268800-49283200 Weak transcription Fetal Brain Male brain
5 chr15:49268800-49283400 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr15:49268800-49283600 Weak transcription Colonic Mucosa Colon
7 chr15:49268800-49284400 Weak transcription Esophagus oesophagus
8 chr15:49268800-49309200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr15:49269000-49280000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr15:49269000-49282800 Weak transcription Fetal Brain Female brain
11 chr15:49269000-49284400 Weak transcription Rectal Smooth Muscle rectum
12 chr15:49269000-49284400 Weak transcription Spleen Spleen
13 chr15:49269200-49282600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr15:49269200-49283600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:49271000-49282800 Weak transcription Gastric stomach
16 chr15:49273000-49284400 Weak transcription Thymus Thymus
17 chr15:49273200-49278400 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr15:49273400-49283400 Weak transcription Fetal Kidney kidney
19 chr15:49273800-49278600 Enhancers Placenta Placenta
20 chr15:49274200-49282400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr15:49274200-49284800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr15:49274600-49280200 Weak transcription Brain Angular Gyrus brain
23 chr15:49274800-49282400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr15:49274800-49283400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr15:49274800-49283400 Weak transcription Brain Substantia Nigra brain
26 chr15:49274800-49283600 Weak transcription K562 blood
27 chr15:49274800-49284200 Weak transcription HMEC breast
28 chr15:49275000-49284400 Weak transcription HepG2 liver
29 chr15:49275600-49283400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr15:49275800-49278600 Enhancers Duodenum Smooth Muscle Duodenum
31 chr15:49275800-49281600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr15:49276200-49280000 Enhancers Liver Liver
33 chr15:49276400-49278800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr15:49276400-49280200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr15:49276400-49284400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr15:49276400-49284400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr15:49276600-49280200 Weak transcription Brain Inferior Temporal Lobe brain
38 chr15:49276800-49278400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr15:49276800-49278400 Enhancers Osteobl bone
40 chr15:49276800-49280200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr15:49276800-49282600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr15:49276800-49283400 Weak transcription NHDF-Ad bronchial
43 chr15:49277000-49280200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr15:49277000-49280200 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr15:49277000-49280400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr15:49277000-49281600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr15:49277200-49278400 Enhancers Ovary ovary
48 chr15:49277200-49278400 Enhancers Right Atrium heart
49 chr15:49277200-49278400 Enhancers Sigmoid Colon Sigmoid Colon
50 chr15:49277200-49280200 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015