The 2.0 version of rSNPBase

Variant report

Variant rs62019326
Chromosome Location chr15:42917387-42917388
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42874800-42929800 Weak transcription Fetal Brain Female brain
2 chr15:42895200-42920800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr15:42897800-42930200 Weak transcription HSMM muscle
4 chr15:42898000-42967800 Weak transcription Fetal Intestine Small intestine
5 chr15:42898400-42932800 Weak transcription Esophagus oesophagus
6 chr15:42898600-42929800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr15:42900600-42928000 Weak transcription Placenta Placenta
8 chr15:42900600-42930000 Weak transcription HMEC breast
9 chr15:42900800-42929800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr15:42901000-42921200 Weak transcription NHDF-Ad bronchial
11 chr15:42901000-42927800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr15:42901400-42928400 Weak transcription Rectal Smooth Muscle rectum
13 chr15:42901400-42929800 Weak transcription Brain Angular Gyrus brain
14 chr15:42901600-42927800 Weak transcription Adipose Nuclei Adipose
15 chr15:42901600-42930000 Weak transcription Brain Hippocampus Middle brain
16 chr15:42901600-42930400 Weak transcription Primary B cells from cord blood blood
17 chr15:42903200-42931000 Weak transcription Fetal Intestine Large intestine
18 chr15:42904000-42930200 Weak transcription Right Ventricle heart
19 chr15:42904200-42929800 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr15:42904400-42921200 Weak transcription Stomach Smooth Muscle stomach
21 chr15:42904600-42930200 Weak transcription Aorta Aorta
22 chr15:42908800-43015000 Weak transcription Fetal Kidney kidney
23 chr15:42909600-42966400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr15:42910200-42927800 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr15:42910200-42929800 Weak transcription Fetal Heart heart
26 chr15:42910600-42920800 Weak transcription Fetal Muscle Leg muscle
27 chr15:42910600-42927600 Weak transcription Left Ventricle heart
28 chr15:42911000-42920800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr15:42912200-42927600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr15:42912200-42927800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr15:42912200-42927800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr15:42912200-42929400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr15:42912600-42920800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr15:42912600-42927800 Weak transcription Fetal Muscle Trunk muscle
35 chr15:42912800-42924600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr15:42912800-42924800 Weak transcription Primary hematopoietic stem cells blood
37 chr15:42912800-42933200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr15:42913200-42925000 Weak transcription Fetal Stomach stomach
39 chr15:42914800-42930200 Weak transcription Spleen Spleen
40 chr15:42915000-42927800 Weak transcription Ovary ovary
41 chr15:42915200-42920800 Weak transcription Brain Germinal Matrix brain
42 chr15:42915200-42925000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr15:42915200-42940000 Weak transcription HepG2 liver
44 chr15:42916400-42919600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr15:42916400-42927800 Weak transcription Colon Smooth Muscle Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015