Variant report

Variant	rs62100703
Chromosome Location	chr18:25247534-25247535
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs62080939	1.00[EUR][1000 genomes]
rs62080940	1.00[EUR][1000 genomes]
rs62080941	1.00[EUR][1000 genomes]
rs62080944	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62080955	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62100702	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62100704	0.90[EUR][1000 genomes]
rs62100706	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs8091101	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761996	chr18:24866083-25818618	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
2	nsv833604	chr18:25226727-25417423	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv962948	chr18:25241568-25248773	Enhancers Flanking Active TSS Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:25240200-25249200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr18:25245000-25248800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr18:25245200-25249200	Enhancers	Osteobl	bone
4	chr18:25245400-25249200	Enhancers	Fetal Heart	heart
5	chr18:25245600-25248000	Weak transcription	NH-A	brain
6	chr18:25245800-25247800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr18:25246000-25249000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr18:25246200-25247600	Enhancers	Fetal Intestine Small	intestine
9	chr18:25246200-25247800	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr18:25246600-25247600	Enhancers	Liver	Liver
11	chr18:25246800-25248000	Weak transcription	HSMMtube	muscle
12	chr18:25246800-25248800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr18:25247400-25247600	Enhancers	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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