Variant report

Variant rs62122401
Chromosome Location chr19:56596470-56596471
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56578200-56596800 Weak transcription Gastric stomach
2 chr19:56592600-56596800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:56592600-56599400 Weak transcription Colon Smooth Muscle Colon
4 chr19:56592600-56599800 Weak transcription Aorta Aorta
5 chr19:56592600-56600000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr19:56592600-56600000 Weak transcription Hela-S3 cervix
7 chr19:56592600-56620000 Weak transcription HSMMtube muscle
8 chr19:56592800-56596600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr19:56592800-56596600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr19:56592800-56596600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr19:56592800-56596600 Weak transcription Esophagus oesophagus
12 chr19:56592800-56596600 Weak transcription Lung lung
13 chr19:56592800-56596800 Weak transcription Rectal Smooth Muscle rectum
14 chr19:56592800-56597400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr19:56592800-56597600 Weak transcription Brain Germinal Matrix brain
16 chr19:56592800-56598000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr19:56592800-56598600 Weak transcription Ovary ovary
18 chr19:56592800-56599800 Weak transcription Placenta Amnion Placenta Amnion
19 chr19:56592800-56600000 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr19:56592800-56600000 Weak transcription Dnd41 blood
21 chr19:56592800-56601200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr19:56592800-56602200 Weak transcription NH-A brain
23 chr19:56592800-56602400 Weak transcription Brain Anterior Caudate brain
24 chr19:56592800-56602800 Weak transcription Right Atrium heart
25 chr19:56592800-56622600 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr19:56593000-56596600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:56593000-56596600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr19:56593000-56596600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr19:56593000-56596600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr19:56593000-56596600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr19:56593000-56596600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr19:56593000-56596600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr19:56593000-56596600 Weak transcription Left Ventricle heart
34 chr19:56593000-56596800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr19:56593000-56596800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr19:56593000-56596800 Weak transcription Duodenum Mucosa Duodenum
37 chr19:56593000-56596800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr19:56593000-56597000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr19:56593000-56598600 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr19:56593000-56599800 Weak transcription Adipose Nuclei Adipose
41 chr19:56593000-56599800 Weak transcription Liver Liver
42 chr19:56593000-56599800 Weak transcription Brain Angular Gyrus brain
43 chr19:56593000-56599800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr19:56593000-56599800 Weak transcription Small Intestine intestine
45 chr19:56593000-56600000 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr19:56593000-56600000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr19:56593000-56600000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr19:56593000-56600000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr19:56593000-56600000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr19:56593000-56600400 Weak transcription HepG2 liver

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