The 2.0 version of rSNPBase

Variant report

Variant rs62133899
Chromosome Location chr2:32971430-32971431
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32868800-32980800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:32876400-32980800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr2:32888600-32981800 Weak transcription Gastric stomach
4 chr2:32900000-32974200 Weak transcription Fetal Intestine Large intestine
5 chr2:32922400-32976600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:32922400-33006000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:32922600-32977400 Weak transcription A549 lung
8 chr2:32929000-33003600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr2:32929800-33016800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr2:32930400-32974200 Weak transcription Duodenum Mucosa Duodenum
11 chr2:32938200-32998000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr2:32938200-33016200 Weak transcription HUVEC blood vessel
13 chr2:32939200-32980800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:32940600-32977200 Weak transcription Brain Hippocampus Middle brain
15 chr2:32941200-32976200 Weak transcription NHLF lung
16 chr2:32945000-33028200 Weak transcription Aorta Aorta
17 chr2:32947600-32978800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr2:32951000-32985400 Weak transcription Esophagus oesophagus
19 chr2:32951000-33050000 Weak transcription Rectal Smooth Muscle rectum
20 chr2:32951200-32973600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr2:32951200-32973800 Weak transcription Fetal Muscle Leg muscle
22 chr2:32951200-32978000 Weak transcription Lung lung
23 chr2:32952400-32984800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr2:32955200-32983400 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr2:32957000-32980400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr2:32957400-32977800 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr2:32958800-32985000 Weak transcription Hela-S3 cervix
28 chr2:32960000-32972400 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr2:32960000-32981000 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr2:32960000-32998000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:32960000-33006000 Weak transcription Colon Smooth Muscle Colon
32 chr2:32961600-32983400 Weak transcription Small Intestine intestine
33 chr2:32963400-32976000 Weak transcription Fetal Stomach stomach
34 chr2:32963400-32978600 Weak transcription Fetal Intestine Small intestine
35 chr2:32963600-32977200 Weak transcription Stomach Smooth Muscle stomach
36 chr2:32963800-32971800 Weak transcription Fetal Brain Male brain
37 chr2:32963800-32978000 Weak transcription Pancreas Pancrea
38 chr2:32964200-32977800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr2:32965400-32973600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:32965400-32975200 Weak transcription HepG2 liver
41 chr2:32965400-32977600 Weak transcription Fetal Lung lung
42 chr2:32965400-32980800 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr2:32966400-32974600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr2:32966600-32974000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr2:32967000-32980800 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr2:32967000-32983400 Weak transcription Fetal Muscle Trunk muscle
47 chr2:32967000-32985000 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr2:32967800-32971800 Weak transcription HSMM muscle
49 chr2:32967800-32975200 Weak transcription K562 blood
50 chr2:32968000-32976000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015