The 2.0 version of rSNPBase

Variant report

Variant rs62134712
Chromosome Location chr2:54902115-54902116
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54894600-54902200 Weak transcription Psoas Muscle Psoas
2 chr2:54895800-54902200 Weak transcription Ovary ovary
3 chr2:54896800-54902400 Weak transcription K562 blood
4 chr2:54897000-54903800 Weak transcription Brain Germinal Matrix brain
5 chr2:54897200-54907800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr2:54897600-54902800 Weak transcription Gastric stomach
7 chr2:54898200-54902600 Weak transcription Fetal Heart heart
8 chr2:54898200-54907000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:54898400-54902800 Weak transcription Aorta Aorta
10 chr2:54898400-54904600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:54898600-54903400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:54898600-54907800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:54899200-54903400 Enhancers Pancreas Pancrea
14 chr2:54899200-54903400 Enhancers Spleen Spleen
15 chr2:54899600-54902600 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr2:54899600-54903000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr2:54899600-54903200 Weak transcription NH-A brain
18 chr2:54899800-54902800 Enhancers Fetal Lung lung
19 chr2:54899800-54903000 Weak transcription HSMM muscle
20 chr2:54900000-54902600 Enhancers Fetal Thymus thymus
21 chr2:54900000-54908600 Enhancers NHDF-Ad bronchial
22 chr2:54900400-54902400 Enhancers Fetal Muscle Trunk muscle
23 chr2:54900400-54904000 Enhancers Lung lung
24 chr2:54901000-54902800 Weak transcription Esophagus oesophagus
25 chr2:54901000-54903000 Weak transcription NHLF lung
26 chr2:54901000-54904000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:54901000-54907000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr2:54901000-54907800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr2:54901200-54902200 Enhancers Primary monocytes fromperipheralblood blood
30 chr2:54901200-54902400 Weak transcription Liver Liver
31 chr2:54901200-54902800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:54901200-54903000 Enhancers Placenta Placenta
33 chr2:54901200-54903000 Weak transcription HSMMtube muscle
34 chr2:54901200-54903400 Weak transcription A549 lung
35 chr2:54901200-54904200 Weak transcription Fetal Stomach stomach
36 chr2:54901200-54904600 Weak transcription Primary B cells from peripheral blood blood
37 chr2:54901200-54907800 Weak transcription Primary hematopoietic stem cells blood
38 chr2:54901400-54902200 Enhancers Skeletal Muscle Male skeletal muscle
39 chr2:54901400-54902200 Enhancers Monocytes-CD14+_RO01746 blood
40 chr2:54901400-54902400 Weak transcription Right Atrium heart
41 chr2:54901400-54902800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr2:54901400-54902800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr2:54901400-54902800 Weak transcription Stomach Mucosa stomach
44 chr2:54901400-54902800 Enhancers NHEK skin
45 chr2:54901400-54903400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:54901400-54903600 Weak transcription Muscle Satellite Cultured Cells --
47 chr2:54901400-54905000 Weak transcription Primary B cells from cord blood blood
48 chr2:54901400-54907600 Weak transcription HMEC breast
49 chr2:54901400-54908600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr2:54901600-54902400 Enhancers Brain Substantia Nigra brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015