Variant report

Variant rs62177195
Chromosome Location chr2:180308835-180308836
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180306600-180311400 Strong transcription Liver Liver
2 chr2:180306800-180309000 Enhancers Primary monocytes fromperipheralblood blood
3 chr2:180307000-180309800 Enhancers Placenta Amnion Placenta Amnion
4 chr2:180307000-180310200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr2:180307200-180310400 Enhancers ES-WA7 Cell Line embryonic stem cell
6 chr2:180307400-180309800 Enhancers HUES64 Cell Line embryonic stem cell
7 chr2:180307400-180310200 Enhancers H1 Cell Line embryonic stem cell
8 chr2:180307400-180310200 Enhancers iPS-18 Cell Line embryonic stem cell
9 chr2:180307400-180310600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr2:180307400-180312800 Enhancers NHEK skin
11 chr2:180307600-180309800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr2:180307800-180309200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr2:180307800-180310200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr2:180307800-180310600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr2:180307800-180320800 Weak transcription HepG2 liver
16 chr2:180308000-180309200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr2:180308000-180309800 Enhancers Fetal Intestine Large intestine
18 chr2:180308000-180310400 Enhancers iPS-20b Cell Line embryonic stem cell
19 chr2:180308200-180309200 Enhancers Primary neutrophils fromperipheralblood blood
20 chr2:180308200-180310200 Enhancers HUES48 Cell Line embryonic stem cell
21 chr2:180308200-180332600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:180308400-180309000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:180308400-180310400 Enhancers H9 Cell Line embryonic stem cell
24 chr2:180308600-180309200 Enhancers Fetal Lung lung
25 chr2:180308600-180309400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr2:180308600-180309800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:180308600-180309800 Enhancers Fetal Intestine Small intestine
28 chr2:180308600-180310200 Enhancers HUES6 Cell Line embryonic stem cell
29 chr2:180308600-180310400 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr2:180308600-180310600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr2:180308600-180311200 Weak transcription HMEC breast
32 chr2:180308800-180309000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:180308800-180309200 Enhancers Skeletal Muscle Male skeletal muscle
34 chr2:180308800-180309400 Enhancers Fetal Brain Female brain
35 chr2:180308800-180311400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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