Variant report

Variant rs62182376
Chromosome Location chr2:172692225-172692226
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172681000-172695000 Weak transcription Pancreas Pancrea
2 chr2:172681800-172693800 Strong transcription Fetal Adrenal Gland Adrenal Gland
3 chr2:172682000-172694000 Strong transcription Primary T cells fromperipheralblood blood
4 chr2:172683400-172693800 Strong transcription Stomach Smooth Muscle stomach
5 chr2:172683400-172694400 Strong transcription Primary T cells from cord blood blood
6 chr2:172683600-172693800 Strong transcription Left Ventricle heart
7 chr2:172683800-172694200 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr2:172684400-172694000 Strong transcription Primary T helper cells PMA-I stimulated --
9 chr2:172685600-172693000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:172685600-172694600 Strong transcription Primary T helper naive cells fromperipheralblood blood
11 chr2:172685600-172694800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr2:172685800-172694000 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr2:172686000-172694000 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr2:172686200-172698800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr2:172686800-172693600 Strong transcription Colon Smooth Muscle Colon
16 chr2:172687000-172694600 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr2:172687200-172693600 Strong transcription Rectal Smooth Muscle rectum
18 chr2:172687200-172694000 Strong transcription Duodenum Smooth Muscle Duodenum
19 chr2:172687400-172693200 Strong transcription Colonic Mucosa Colon
20 chr2:172687400-172693400 Strong transcription HSMMtube muscle
21 chr2:172687400-172693800 Strong transcription Brain Anterior Caudate brain
22 chr2:172687400-172693800 Strong transcription Brain Inferior Temporal Lobe brain
23 chr2:172687400-172693800 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr2:172687400-172694000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr2:172687400-172694000 Strong transcription Brain Cingulate Gyrus brain
26 chr2:172687400-172694000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr2:172687400-172694000 Strong transcription K562 blood
28 chr2:172687600-172693400 Strong transcription Brain Hippocampus Middle brain
29 chr2:172687600-172693600 Strong transcription Adipose Nuclei Adipose
30 chr2:172687600-172693800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
31 chr2:172687600-172693800 Strong transcription Brain Angular Gyrus brain
32 chr2:172688000-172693800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:172688400-172693800 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr2:172688400-172694000 Strong transcription Fetal Thymus thymus
35 chr2:172688800-172693200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:172688800-172693800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:172688800-172693800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr2:172689000-172693600 Strong transcription Placenta Placenta
39 chr2:172689000-172694600 Strong transcription HUVEC blood vessel
40 chr2:172689000-172696400 Strong transcription Primary B cells from peripheral blood blood
41 chr2:172689400-172692800 Weak transcription Brain Substantia Nigra brain
42 chr2:172689400-172693600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:172689400-172693800 Strong transcription A549 lung
44 chr2:172689400-172693800 Strong transcription NHLF lung
45 chr2:172689400-172712200 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr2:172689600-172694000 Strong transcription Brain Germinal Matrix brain
47 chr2:172689600-172694000 Strong transcription Fetal Brain Female brain
48 chr2:172689600-172694000 Strong transcription Skeletal Muscle Female skeletal muscle
49 chr2:172689600-172695200 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr2:172689600-172696600 Strong transcription Monocytes-CD14+_RO01746 blood

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