Variant report

Variant rs62217413
Chromosome Location chr21:44862692-44862693
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:44848200-44862800 Weak transcription Right Atrium heart
2 chr21:44855400-44863000 Weak transcription H9 Cell Line embryonic stem cell
3 chr21:44856800-44873200 Enhancers Placenta Placenta
4 chr21:44857400-44866000 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr21:44858800-44863400 Enhancers Fetal Intestine Large intestine
6 chr21:44858800-44867800 Enhancers Fetal Intestine Small intestine
7 chr21:44859000-44864000 Enhancers Stomach Mucosa stomach
8 chr21:44859200-44863200 Enhancers Pancreas Pancrea
9 chr21:44859200-44863800 Enhancers Rectal Mucosa Donor 31 rectum
10 chr21:44859400-44862800 Weak transcription HSMM muscle
11 chr21:44859400-44883600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr21:44859800-44862800 Weak transcription HSMMtube muscle
13 chr21:44859800-44864800 Enhancers HMEC breast
14 chr21:44860000-44864000 Enhancers Lung lung
15 chr21:44860600-44865200 Weak transcription Placenta Amnion Placenta Amnion
16 chr21:44860800-44863800 Enhancers Rectal Mucosa Donor 29 rectum
17 chr21:44861200-44864600 Weak transcription GM12878-XiMat blood
18 chr21:44861200-44865800 Enhancers Duodenum Mucosa Duodenum
19 chr21:44861400-44863000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr21:44861400-44863000 Enhancers Sigmoid Colon Sigmoid Colon
21 chr21:44861400-44863800 Enhancers Fetal Muscle Leg muscle
22 chr21:44861400-44864000 Enhancers Colonic Mucosa Colon
23 chr21:44861400-44865200 Bivalent Enhancer Fetal Muscle Trunk muscle
24 chr21:44861400-44865400 Enhancers Esophagus oesophagus
25 chr21:44861600-44862800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr21:44861600-44862800 Weak transcription Muscle Satellite Cultured Cells --
27 chr21:44861600-44862800 Enhancers Adipose Nuclei Adipose
28 chr21:44861600-44866400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr21:44861800-44862800 Weak transcription NHEK skin
30 chr21:44861800-44863800 Enhancers HepG2 liver
31 chr21:44861800-44869200 Weak transcription Fetal Brain Female brain
32 chr21:44862000-44862800 Weak transcription Gastric stomach
33 chr21:44862000-44863200 Enhancers Left Ventricle heart
34 chr21:44862000-44864200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr21:44862000-44864200 Enhancers Right Ventricle heart
36 chr21:44862000-44864600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr21:44862000-44870400 Enhancers A549 lung
38 chr21:44862200-44862800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr21:44862200-44862800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
40 chr21:44862200-44862800 Enhancers Hela-S3 cervix
41 chr21:44862200-44863200 Enhancers Small Intestine intestine
42 chr21:44862200-44863400 Enhancers Duodenum Smooth Muscle Duodenum
43 chr21:44862200-44863400 Enhancers Fetal Stomach stomach
44 chr21:44862200-44863800 Enhancers Fetal Heart heart
45 chr21:44862200-44866800 Weak transcription Liver Liver
46 chr21:44862400-44863400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
47 chr21:44862600-44863000 Enhancers Fetal Lung lung
48 chr21:44862600-44863400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr21:44862600-44864000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr21:44862600-44865000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland

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