Variant report

Variant rs62219860
Chromosome Location chr22:20820533-20820534
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20792400-20832000 Weak transcription A549 lung
2 chr22:20793200-20825000 Weak transcription Fetal Kidney kidney
3 chr22:20793800-20821600 Weak transcription Fetal Heart heart
4 chr22:20793800-20825000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr22:20794400-20827800 Weak transcription Stomach Mucosa stomach
6 chr22:20799200-20822800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr22:20801200-20823400 Weak transcription Fetal Brain Male brain
8 chr22:20801200-20848800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr22:20806600-20837000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr22:20810600-20820600 Strong transcription Fetal Intestine Small intestine
11 chr22:20810600-20825000 Weak transcription NHDF-Ad bronchial
12 chr22:20810600-20825800 Weak transcription NHEK skin
13 chr22:20810600-20827400 Strong transcription Fetal Stomach stomach
14 chr22:20810600-20848800 Weak transcription NH-A brain
15 chr22:20810800-20821600 Weak transcription Hela-S3 cervix
16 chr22:20811000-20822600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr22:20811000-20848800 Weak transcription HSMM muscle
18 chr22:20811200-20827400 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr22:20811200-20840600 Weak transcription HSMMtube muscle
20 chr22:20811200-20842800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr22:20814200-20822800 Weak transcription Placenta Amnion Placenta Amnion
22 chr22:20814200-20825200 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr22:20816600-20827600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr22:20816600-20827600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr22:20816800-20826200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr22:20817000-20821800 Strong transcription Brain Germinal Matrix brain
27 chr22:20817400-20821200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr22:20817800-20820600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr22:20817800-20821200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr22:20818200-20821600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr22:20818200-20821800 Enhancers Primary T helper cells fromperipheralblood blood
32 chr22:20818200-20825000 Weak transcription H9 Cell Line embryonic stem cell
33 chr22:20818200-20827400 Weak transcription H1 Cell Line embryonic stem cell
34 chr22:20818200-20835000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr22:20818400-20825200 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr22:20818600-20820800 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr22:20818600-20821400 Enhancers Primary neutrophils fromperipheralblood blood
38 chr22:20818600-20830400 Weak transcription Psoas Muscle Psoas
39 chr22:20818600-20830600 Weak transcription Colonic Mucosa Colon
40 chr22:20819000-20820600 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr22:20819000-20821400 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr22:20819000-20824800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr22:20819000-20825000 Weak transcription HepG2 liver
44 chr22:20819000-20825400 Weak transcription Primary hematopoietic stem cells blood
45 chr22:20819000-20826000 Strong transcription Placenta Placenta
46 chr22:20819000-20826400 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr22:20819000-20846600 Weak transcription GM12878-XiMat blood
48 chr22:20819200-20821000 Strong transcription Fetal Muscle Leg muscle
49 chr22:20819200-20821400 Enhancers Primary T killer naive cells fromperipheralblood blood
50 chr22:20819200-20821800 Enhancers Primary T killer memory cells from peripheral blood blood

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