Variant report
| Variant | rs62230460 |
|---|---|
| Chromosome Location | chr3:24519970-24519971 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:24499600-24526800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 2 | chr3:24509600-24531000 | Weak transcription | Fetal Lung | lung |
| 3 | chr3:24515600-24533200 | Weak transcription | Stomach Mucosa | stomach |
| 4 | chr3:24517200-24520400 | Enhancers | Colon Smooth Muscle | Colon |
| 5 | chr3:24517400-24522600 | Enhancers | Liver | Liver |
| 6 | chr3:24517800-24520600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr3:24517800-24521000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 8 | chr3:24517800-24521000 | Weak transcription | Pancreas | Pancrea |
| 9 | chr3:24517800-24521000 | Weak transcription | HMEC | breast |
| 10 | chr3:24517800-24521200 | Weak transcription | Aorta | Aorta |
| 11 | chr3:24517800-24521800 | Weak transcription | Adipose Nuclei | Adipose |
| 12 | chr3:24517800-24523000 | Weak transcription | Fetal Intestine Large | intestine |
| 13 | chr3:24517800-24523600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 14 | chr3:24517800-24523800 | Weak transcription | Gastric | stomach |
| 15 | chr3:24517800-24527000 | Weak transcription | Lung | lung |
| 16 | chr3:24517800-24527000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 17 | chr3:24517800-24527000 | Weak transcription | Hela-S3 | cervix |
| 18 | chr3:24517800-24528600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 19 | chr3:24517800-24529000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 20 | chr3:24518000-24521400 | Weak transcription | NHEK | skin |
| 21 | chr3:24519000-24520400 | Enhancers | H9 Cell Line | embryonic stem cell |
| 22 | chr3:24519000-24520600 | Enhancers | Psoas Muscle | Psoas |
| 23 | chr3:24519200-24520000 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
| 24 | chr3:24519200-24521200 | Weak transcription | Right Ventricle | heart |
| 25 | chr3:24519200-24521800 | Weak transcription | HepG2 | liver |
| 26 | chr3:24519200-24526800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 27 | chr3:24519400-24520000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 28 | chr3:24519400-24520400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 29 | chr3:24519400-24520400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 30 | chr3:24519400-24520400 | Bivalent Enhancer | iPS-18 Cell Line | embryonic stem cell |
| 31 | chr3:24519400-24520400 | Bivalent Enhancer | iPS-20b Cell Line | embryonic stem cell |
| 32 | chr3:24519400-24520400 | Weak transcription | Fetal Intestine Small | intestine |
| 33 | chr3:24519400-24521000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr3:24519400-24521200 | Weak transcription | Left Ventricle | heart |
| 35 | chr3:24519400-24525200 | Weak transcription | K562 | blood |
| 36 | chr3:24519400-24525400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr3:24519400-24527400 | Weak transcription | Right Atrium | heart |
| 38 | chr3:24519400-24532800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 39 | chr3:24519600-24520200 | Bivalent Enhancer | HUES48 Cell Line | embryonic stem cell |
| 40 | chr3:24519600-24520800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr3:24519600-24521000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 42 | chr3:24519600-24521400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 43 | chr3:24519800-24520200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
