The 2.0 version of rSNPBase

Variant report

Variant rs62232902
Chromosome Location chr22:33194162-33194163
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33176800-33196600 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr22:33182600-33195400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr22:33185200-33197200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr22:33191400-33197000 Weak transcription Fetal Intestine Small intestine
5 chr22:33192400-33194400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr22:33193000-33195000 Weak transcription Placenta Amnion Placenta Amnion
7 chr22:33193000-33195600 Weak transcription Spleen Spleen
8 chr22:33193000-33196200 Weak transcription Fetal Kidney kidney
9 chr22:33193000-33196600 Weak transcription Left Ventricle heart
10 chr22:33193000-33196800 Weak transcription Brain Angular Gyrus brain
11 chr22:33193000-33197200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr22:33193200-33195000 Weak transcription Placenta Placenta
13 chr22:33193200-33195600 Weak transcription Lung lung
14 chr22:33193200-33195800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr22:33193200-33196000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr22:33193200-33196200 Weak transcription NHLF lung
17 chr22:33193200-33196600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr22:33193200-33196600 Weak transcription Fetal Muscle Trunk muscle
19 chr22:33193200-33196600 Weak transcription Right Ventricle heart
20 chr22:33193200-33196800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr22:33193200-33196800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr22:33193200-33196800 Weak transcription Fetal Lung lung
23 chr22:33193200-33197000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr22:33193200-33197000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr22:33193200-33197000 Weak transcription Liver Liver
26 chr22:33193200-33197200 Weak transcription Muscle Satellite Cultured Cells --
27 chr22:33193200-33197200 Weak transcription Brain Substantia Nigra brain
28 chr22:33193200-33197200 Weak transcription Esophagus oesophagus
29 chr22:33193200-33197200 Weak transcription Pancreas Pancrea
30 chr22:33193400-33195400 Weak transcription Fetal Muscle Leg muscle
31 chr22:33193400-33195600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr22:33193400-33195600 Weak transcription Adipose Nuclei Adipose
33 chr22:33193400-33195600 Weak transcription Fetal Stomach stomach
34 chr22:33193400-33195800 Weak transcription Fetal Heart heart
35 chr22:33193400-33196000 Weak transcription Colon Smooth Muscle Colon
36 chr22:33193400-33196000 Weak transcription Stomach Smooth Muscle stomach
37 chr22:33193400-33196200 Weak transcription Right Atrium heart
38 chr22:33193400-33196200 Weak transcription NHDF-Ad bronchial
39 chr22:33193400-33196400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr22:33193400-33196800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr22:33193400-33196800 Weak transcription HMEC breast
42 chr22:33193400-33197000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr22:33193400-33197000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr22:33193400-33197200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr22:33193400-33197200 Weak transcription Brain Cingulate Gyrus brain
46 chr22:33193600-33195400 Weak transcription HSMM muscle
47 chr22:33193600-33195400 Weak transcription HSMMtube muscle
48 chr22:33193600-33197000 Weak transcription Brain Hippocampus Middle brain
49 chr22:33193600-33197000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr22:33193800-33195600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015