Variant report

Variant rs62290486
Chromosome Location chr3:179674666-179674667
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179660600-179680800 Weak transcription Pancreas Pancrea
2 chr3:179668000-179675200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr3:179671800-179676400 Enhancers Brain Cingulate Gyrus brain
4 chr3:179672200-179676000 Weak transcription Brain Anterior Caudate brain
5 chr3:179672200-179679600 Weak transcription H9 Cell Line embryonic stem cell
6 chr3:179672800-179674800 Weak transcription Brain Hippocampus Middle brain
7 chr3:179673600-179675000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr3:179673600-179675800 Enhancers Primary hematopoietic stem cells blood
9 chr3:179673800-179675400 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr3:179674000-179674800 Enhancers Primary T helper cells fromperipheralblood blood
11 chr3:179674000-179675200 Enhancers Primary B cells from peripheral blood blood
12 chr3:179674000-179675200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr3:179674200-179674800 Enhancers Primary T cells from cord blood blood
14 chr3:179674200-179674800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr3:179674200-179675800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr3:179674200-179676400 Enhancers Primary neutrophils fromperipheralblood blood
17 chr3:179674400-179674800 Flanking Active TSS Thymus Thymus
18 chr3:179674400-179674800 Enhancers Osteobl bone
19 chr3:179674400-179675000 Enhancers Primary T helper cells PMA-I stimulated --
20 chr3:179674400-179676200 Enhancers Primary monocytes fromperipheralblood blood
21 chr3:179674400-179676200 Enhancers Brain Substantia Nigra brain
22 chr3:179674400-179676400 Enhancers Brain Inferior Temporal Lobe brain
23 chr3:179674400-179676600 Enhancers Brain Angular Gyrus brain
24 chr3:179674600-179675000 Enhancers Primary T helper naive cells from peripheral blood blood
25 chr3:179674600-179675000 Active TSS Fetal Thymus thymus
26 chr3:179674600-179675800 Flanking Active TSS GM12878-XiMat blood
27 chr3:179674600-179677400 Flanking Active TSS Dnd41 blood

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