Variant report

Variant rs62296078
Chromosome Location chr4:1041700-1041701
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1038000-1042000 Bivalent Enhancer Fetal Stomach stomach
2 chr4:1038600-1046000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr4:1039600-1041800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr4:1039600-1042200 Enhancers Brain Hippocampus Middle brain
5 chr4:1040000-1042000 Enhancers Pancreas Pancrea
6 chr4:1040200-1041800 Bivalent Enhancer Fetal Muscle Trunk muscle
7 chr4:1040200-1042000 Bivalent Enhancer Placenta Placenta
8 chr4:1040200-1042200 Bivalent Enhancer Fetal Muscle Leg muscle
9 chr4:1040400-1042000 Bivalent Enhancer Fetal Intestine Large intestine
10 chr4:1040400-1042000 Bivalent Enhancer Stomach Mucosa stomach
11 chr4:1040600-1041800 Enhancers Brain Angular Gyrus brain
12 chr4:1040600-1041800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
13 chr4:1040600-1041800 Active TSS Rectal Smooth Muscle rectum
14 chr4:1040600-1041800 Flanking Active TSS Osteobl bone
15 chr4:1040600-1042000 Enhancers Liver Liver
16 chr4:1040600-1042000 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr4:1040600-1042400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr4:1040800-1041800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr4:1040800-1041800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr4:1040800-1041800 Enhancers Esophagus oesophagus
21 chr4:1040800-1041800 Enhancers NHDF-Ad bronchial
22 chr4:1040800-1042000 Enhancers Spleen Spleen
23 chr4:1040800-1042200 Enhancers Gastric stomach
24 chr4:1040800-1048600 Weak transcription Right Atrium heart
25 chr4:1041000-1041800 Enhancers Brain Cingulate Gyrus brain
26 chr4:1041000-1041800 Enhancers Ovary ovary
27 chr4:1041000-1042000 Flanking Active TSS Duodenum Mucosa Duodenum
28 chr4:1041000-1042200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr4:1041000-1042400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr4:1041000-1042400 Enhancers NH-A brain
31 chr4:1041200-1041800 Enhancers Brain Inferior Temporal Lobe brain
32 chr4:1041200-1041800 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
33 chr4:1041200-1044600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:1041200-1049200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr4:1041400-1041800 Active TSS Brain Anterior Caudate brain
36 chr4:1041400-1041800 Flanking Active TSS Brain Substantia Nigra brain
37 chr4:1041400-1041800 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
38 chr4:1041400-1041800 Flanking Active TSS HUVEC blood vessel
39 chr4:1041400-1041800 Active TSS NHLF lung
40 chr4:1041400-1042000 Flanking Active TSS Colonic Mucosa Colon
41 chr4:1041400-1042000 Enhancers Rectal Mucosa Donor 31 rectum
42 chr4:1041600-1041800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr4:1041600-1041800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:1041600-1041800 Bivalent Enhancer Fetal Thymus thymus
45 chr4:1041600-1042000 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr4:1041600-1042000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr4:1041600-1042000 Enhancers Adipose Nuclei Adipose
48 chr4:1041600-1042400 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr4:1041600-1042800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr4:1041600-1043200 Weak transcription Lung lung

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