Variant report

Variant rs62354540
Chromosome Location chr5:36423391-36423392
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36416800-36423600 Weak transcription Fetal Muscle Leg muscle
2 chr5:36419800-36430200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr5:36420200-36423400 Weak transcription Fetal Thymus thymus
4 chr5:36420200-36423600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:36420200-36423800 Weak transcription Primary hematopoietic stem cells blood
6 chr5:36420200-36423800 Weak transcription Stomach Mucosa stomach
7 chr5:36421000-36423600 Weak transcription Fetal Intestine Large intestine
8 chr5:36421400-36423600 Enhancers Hela-S3 cervix
9 chr5:36422200-36424200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:36422200-36424400 Enhancers Primary hematopoietic stem cells short term culture blood
11 chr5:36422400-36424200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:36422400-36424600 Enhancers Cortex derived primary cultured neurospheres brain
13 chr5:36422600-36424000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr5:36422600-36424000 Enhancers HSMM muscle
15 chr5:36422600-36424000 Enhancers NHDF-Ad bronchial
16 chr5:36422600-36424000 Enhancers Osteobl bone
17 chr5:36422600-36424400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr5:36422600-36424400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr5:36422800-36424000 Enhancers Muscle Satellite Cultured Cells --
20 chr5:36422800-36424000 Enhancers NHEK skin
21 chr5:36422800-36424200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:36422800-36424200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr5:36422800-36432000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr5:36423000-36423400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr5:36423000-36423400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:36423000-36423800 Enhancers ES-I3 Cell Line embryonic stem cell
27 chr5:36423000-36423800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr5:36423000-36423800 Enhancers NHLF lung
29 chr5:36423000-36424000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr5:36423000-36424000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:36423000-36424000 Enhancers Fetal Kidney kidney
32 chr5:36423000-36424400 Enhancers Primary T cells from cord blood blood
33 chr5:36423000-36424600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr5:36423200-36423400 Flanking Active TSS NH-A brain
35 chr5:36423200-36423800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr5:36423200-36423800 Enhancers Brain Anterior Caudate brain
37 chr5:36423200-36424400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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