The 2.0 version of rSNPBase

Variant report

Variant rs62355131
Chromosome Location chr5:53595897-53595898
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53576200-53604400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr5:53584400-53597200 Weak transcription Fetal Intestine Small intestine
3 chr5:53586000-53599600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr5:53587200-53602800 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr5:53588400-53604800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr5:53591000-53598000 Weak transcription Primary T cells from cord blood blood
7 chr5:53591800-53598400 Weak transcription Primary B cells from cord blood blood
8 chr5:53592000-53597800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr5:53592200-53596000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr5:53592200-53597200 Weak transcription Muscle Satellite Cultured Cells --
11 chr5:53592200-53597600 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr5:53592400-53597400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr5:53592400-53597400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr5:53592400-53604000 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr5:53592600-53596200 Weak transcription HSMMtube muscle
16 chr5:53592600-53596600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr5:53592600-53596800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr5:53592600-53597200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:53592600-53597800 Weak transcription Primary hematopoietic stem cells blood
20 chr5:53592600-53598000 Weak transcription Fetal Thymus thymus
21 chr5:53592600-53603600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr5:53592600-53605400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr5:53592800-53597400 Weak transcription Fetal Muscle Leg muscle
24 chr5:53592800-53597600 Weak transcription Liver Liver
25 chr5:53592800-53597800 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr5:53592800-53599200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr5:53592800-53599800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr5:53592800-53605000 Weak transcription Brain Substantia Nigra brain
29 chr5:53592800-53605000 Weak transcription Placenta Placenta
30 chr5:53592800-53605200 Weak transcription Gastric stomach
31 chr5:53593000-53596000 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr5:53593000-53596800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr5:53593000-53597400 Weak transcription Duodenum Mucosa Duodenum
34 chr5:53593000-53597600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr5:53593000-53597800 Weak transcription Pancreas Pancrea
36 chr5:53593000-53599600 Weak transcription H1 Cell Line embryonic stem cell
37 chr5:53593200-53596400 Weak transcription Adipose Nuclei Adipose
38 chr5:53593200-53597400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr5:53593200-53597400 Weak transcription Small Intestine intestine
40 chr5:53593200-53597600 Weak transcription Fetal Heart heart
41 chr5:53593200-53597600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr5:53593200-53597800 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr5:53593200-53604800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr5:53593200-53605000 Weak transcription Psoas Muscle Psoas
45 chr5:53593400-53596000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr5:53593400-53596000 Weak transcription Right Ventricle heart
47 chr5:53593400-53596600 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr5:53593400-53597000 Weak transcription Stomach Mucosa stomach
49 chr5:53593400-53604800 Weak transcription Colon Smooth Muscle Colon
50 chr5:53594200-53597200 Enhancers K562 blood

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Last update: Aug 31, 2015