The 2.0 version of rSNPBase

Variant report

Variant rs62356507
Chromosome Location chr5:40717059-40717060
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:40688800-40718600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr5:40692400-40741200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr5:40692800-40721000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr5:40692800-40733800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr5:40692800-40735000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr5:40693600-40727400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:40694800-40721000 Weak transcription Thymus Thymus
8 chr5:40695200-40727000 Weak transcription HSMM muscle
9 chr5:40699000-40720800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr5:40700800-40720600 Weak transcription Left Ventricle heart
11 chr5:40700800-40720800 Weak transcription Spleen Spleen
12 chr5:40700800-40722200 Weak transcription Lung lung
13 chr5:40701000-40720800 Weak transcription Aorta Aorta
14 chr5:40701000-40722200 Weak transcription Esophagus oesophagus
15 chr5:40705600-40727000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr5:40706400-40717600 Weak transcription Adipose Nuclei Adipose
17 chr5:40706400-40717600 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr5:40706400-40719800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr5:40706400-40720600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr5:40706400-40720800 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr5:40706400-40721000 Weak transcription Stomach Smooth Muscle stomach
22 chr5:40707000-40720600 Weak transcription Fetal Muscle Leg muscle
23 chr5:40707600-40720800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr5:40708400-40717600 Weak transcription A549 lung
25 chr5:40709400-40721000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr5:40709600-40745000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr5:40710400-40721400 Weak transcription Rectal Smooth Muscle rectum
28 chr5:40710600-40720800 Weak transcription Fetal Thymus thymus
29 chr5:40710800-40720800 Weak transcription Primary hematopoietic stem cells blood
30 chr5:40711000-40719200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr5:40711000-40720600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr5:40711000-40720800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr5:40711200-40721000 Weak transcription Fetal Muscle Trunk muscle
34 chr5:40711800-40717400 Weak transcription Fetal Intestine Large intestine
35 chr5:40711800-40720600 Weak transcription Psoas Muscle Psoas
36 chr5:40712400-40720800 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr5:40712800-40719400 Weak transcription Fetal Kidney kidney
38 chr5:40712800-40720400 Weak transcription Primary T cells from cord blood blood
39 chr5:40712800-40741200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr5:40713000-40717200 Weak transcription Liver Liver
41 chr5:40713000-40717400 Weak transcription Fetal Stomach stomach
42 chr5:40713000-40720600 Weak transcription Ovary ovary
43 chr5:40713000-40722200 Weak transcription Gastric stomach
44 chr5:40713000-40722200 Weak transcription Pancreas Pancrea
45 chr5:40713200-40740600 Weak transcription Right Ventricle heart
46 chr5:40713600-40717600 Weak transcription Fetal Intestine Small intestine
47 chr5:40713600-40721000 Weak transcription Brain Germinal Matrix brain
48 chr5:40713600-40734800 Weak transcription Hela-S3 cervix
49 chr5:40714400-40719600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr5:40714400-40720600 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015