Variant report

Variant rs62357560
Chromosome Location chr5:40777792-40777793
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:40756000-40780600 Weak transcription Spleen Spleen
2 chr5:40756200-40797200 Weak transcription Gastric stomach
3 chr5:40756400-40780600 Weak transcription Esophagus oesophagus
4 chr5:40756400-40785200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr5:40756400-40797400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr5:40756600-40780600 Weak transcription Pancreas Pancrea
7 chr5:40756600-40781200 Weak transcription Fetal Brain Male brain
8 chr5:40758400-40777800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr5:40762000-40777800 Strong transcription Primary B cells from peripheral blood blood
10 chr5:40762000-40778400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr5:40765400-40778200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr5:40765400-40796600 Weak transcription Right Ventricle heart
13 chr5:40765600-40796600 Weak transcription Placenta Amnion Placenta Amnion
14 chr5:40766000-40782200 Weak transcription Brain Substantia Nigra brain
15 chr5:40769600-40777800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr5:40769800-40779000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr5:40770000-40777800 Strong transcription Fetal Muscle Leg muscle
18 chr5:40771400-40778000 Strong transcription Primary T cells fromperipheralblood blood
19 chr5:40771600-40788600 Weak transcription Fetal Stomach stomach
20 chr5:40771800-40781400 Weak transcription HSMMtube muscle
21 chr5:40773000-40788200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr5:40773600-40777800 Strong transcription NH-A brain
23 chr5:40774400-40777800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr5:40774400-40780800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr5:40774800-40782200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr5:40776200-40782000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr5:40776200-40797000 Weak transcription Colonic Mucosa Colon
28 chr5:40776400-40781800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr5:40776400-40782000 Weak transcription Colon Smooth Muscle Colon
30 chr5:40776400-40784800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr5:40776600-40777800 Strong transcription Primary monocytes fromperipheralblood blood
32 chr5:40776600-40777800 Strong transcription Osteobl bone
33 chr5:40776600-40779600 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr5:40776600-40782000 Weak transcription Small Intestine intestine
35 chr5:40776600-40786200 Weak transcription GM12878-XiMat blood
36 chr5:40776600-40787600 Weak transcription Hela-S3 cervix
37 chr5:40776800-40779200 Weak transcription Placenta Placenta
38 chr5:40776800-40781000 Weak transcription NHDF-Ad bronchial
39 chr5:40776800-40782000 Weak transcription Brain Germinal Matrix brain
40 chr5:40776800-40782800 Weak transcription H9 Cell Line embryonic stem cell
41 chr5:40776800-40784600 Weak transcription HUVEC blood vessel
42 chr5:40777000-40778800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr5:40777000-40779000 Weak transcription Fetal Muscle Trunk muscle
44 chr5:40777000-40779800 Weak transcription HepG2 liver
45 chr5:40777000-40780400 Weak transcription A549 lung
46 chr5:40777000-40780400 Weak transcription NHEK skin
47 chr5:40777000-40780600 Weak transcription Aorta Aorta
48 chr5:40777000-40780600 Weak transcription Left Ventricle heart
49 chr5:40777000-40780800 Weak transcription Adipose Nuclei Adipose
50 chr5:40777000-40781600 Weak transcription HSMM muscle

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