Variant report

Variant rs62372191
Chromosome Location chr5:53516407-53516408
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53507200-53518400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:53507200-53519600 Weak transcription Left Ventricle heart
3 chr5:53508400-53531200 Weak transcription Gastric stomach
4 chr5:53510800-53519600 Weak transcription Right Ventricle heart
5 chr5:53511000-53519800 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr5:53511400-53518200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:53512800-53518000 Weak transcription H1 Cell Line embryonic stem cell
8 chr5:53513400-53521800 Weak transcription Esophagus oesophagus
9 chr5:53513800-53518400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr5:53514400-53518200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr5:53514600-53516800 Weak transcription Rectal Smooth Muscle rectum
12 chr5:53514600-53521800 Weak transcription Fetal Muscle Leg muscle
13 chr5:53515400-53524800 Weak transcription NHDF-Ad bronchial
14 chr5:53515600-53516600 Enhancers HUES64 Cell Line embryonic stem cell
15 chr5:53515800-53516800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:53516000-53516800 Enhancers Fetal Intestine Large intestine
17 chr5:53516000-53517000 Enhancers HUES48 Cell Line embryonic stem cell
18 chr5:53516000-53517000 Active TSS Colon Smooth Muscle Colon
19 chr5:53516000-53517000 Active TSS Right Atrium heart
20 chr5:53516000-53517000 Active TSS NHLF lung
21 chr5:53516000-53517200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:53516000-53517200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr5:53516000-53517400 Enhancers HUES6 Cell Line embryonic stem cell
24 chr5:53516200-53516600 Enhancers Fetal Kidney kidney
25 chr5:53516200-53516600 Active TSS Fetal Lung lung
26 chr5:53516200-53516800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:53516200-53517000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr5:53516200-53517000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr5:53516200-53517200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr5:53516400-53516600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr5:53516400-53516600 Active TSS Liver Liver
32 chr5:53516400-53516600 Enhancers Fetal Intestine Small intestine
33 chr5:53516400-53516800 Active TSS Pancreatic Islets Pancreatic Islet
34 chr5:53516400-53516800 Active TSS Pancreas Pancrea
35 chr5:53516400-53518200 Weak transcription iPS-20b Cell Line embryonic stem cell

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