Variant report

Variant rs62395828
Chromosome Location chr6:31788479-31788480
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31783600-31789000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:31785400-31789800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr6:31785800-31788600 Flanking Active TSS HepG2 liver
4 chr6:31785800-31789000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr6:31786000-31789000 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr6:31786000-31789000 Enhancers Fetal Intestine Small intestine
7 chr6:31786200-31789000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:31786200-31789000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr6:31786200-31789000 Enhancers Fetal Intestine Large intestine
10 chr6:31786400-31788800 Enhancers Primary monocytes fromperipheralblood blood
11 chr6:31786400-31788800 Weak transcription Primary B cells from peripheral blood blood
12 chr6:31786400-31788800 Weak transcription Small Intestine intestine
13 chr6:31786400-31789000 Weak transcription Fetal Brain Male brain
14 chr6:31786400-31789000 Weak transcription Fetal Brain Female brain
15 chr6:31786400-31789000 Weak transcription Fetal Lung lung
16 chr6:31786400-31789000 Weak transcription HSMM muscle
17 chr6:31786400-31789200 Enhancers Spleen Spleen
18 chr6:31786600-31788800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr6:31786600-31788800 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr6:31786600-31788800 Weak transcription Fetal Kidney kidney
21 chr6:31786600-31789000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr6:31786600-31789000 Weak transcription H9 Cell Line embryonic stem cell
23 chr6:31786600-31789000 Weak transcription Primary T cells from cord blood blood
24 chr6:31786600-31789000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr6:31786600-31789000 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr6:31786600-31789000 Enhancers Duodenum Mucosa Duodenum
27 chr6:31786600-31789000 Enhancers Fetal Muscle Leg muscle
28 chr6:31786600-31789000 Weak transcription Placenta Amnion Placenta Amnion
29 chr6:31786600-31789000 Weak transcription HSMMtube muscle
30 chr6:31786600-31789000 Weak transcription NH-A brain
31 chr6:31786600-31789200 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr6:31786600-31789400 Enhancers Stomach Mucosa stomach
33 chr6:31786600-31790200 Active TSS Brain Anterior Caudate brain
34 chr6:31786800-31788600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr6:31786800-31788600 Weak transcription Primary hematopoietic stem cells blood
36 chr6:31786800-31788600 Weak transcription Aorta Aorta
37 chr6:31786800-31788600 Weak transcription GM12878-XiMat blood
38 chr6:31786800-31788800 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr6:31786800-31788800 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr6:31786800-31788800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr6:31786800-31788800 Enhancers Colon Smooth Muscle Colon
42 chr6:31786800-31788800 Enhancers Rectal Mucosa Donor 31 rectum
43 chr6:31786800-31788800 Weak transcription HUVEC blood vessel
44 chr6:31786800-31789000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:31786800-31789000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:31786800-31789000 Enhancers Primary T helper cells PMA-I stimulated --
47 chr6:31786800-31789000 Enhancers Primary T helper cells fromperipheralblood blood
48 chr6:31786800-31789000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr6:31786800-31789200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:31786800-31789200 Enhancers Liver Liver

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