The 2.0 version of rSNPBase

Variant report

Variant rs62419723
Chromosome Location chr6:71517239-71517240
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71444800-71523600 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr6:71468800-71532200 Weak transcription Primary T cells fromperipheralblood blood
3 chr6:71473800-71520200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr6:71474600-71568800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:71489000-71517400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr6:71489000-71521800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:71489200-71517800 Weak transcription Fetal Thymus thymus
8 chr6:71491800-71526200 Weak transcription HSMM muscle
9 chr6:71492000-71522200 Weak transcription Brain Angular Gyrus brain
10 chr6:71492400-71563600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr6:71493000-71526000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:71500800-71517600 Weak transcription Brain Cingulate Gyrus brain
13 chr6:71501800-71520000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr6:71503600-71522800 Weak transcription Rectal Smooth Muscle rectum
15 chr6:71504400-71517400 Weak transcription Brain Anterior Caudate brain
16 chr6:71505600-71534400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:71506800-71570600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr6:71507800-71523400 Weak transcription GM12878-XiMat blood
19 chr6:71508200-71517400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:71508200-71523200 Weak transcription Primary B cells from peripheral blood blood
21 chr6:71508200-71531400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr6:71508400-71543800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:71509800-71520000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:71511600-71554600 Weak transcription Dnd41 blood
25 chr6:71512200-71523800 Weak transcription HSMMtube muscle
26 chr6:71512600-71523800 Weak transcription Right Ventricle heart
27 chr6:71514400-71523800 Weak transcription Psoas Muscle Psoas
28 chr6:71514800-71535200 Weak transcription Stomach Smooth Muscle stomach
29 chr6:71514800-71548400 Weak transcription Ovary ovary
30 chr6:71515200-71518600 Weak transcription Stomach Mucosa stomach
31 chr6:71515600-71518400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr6:71515600-71518400 Weak transcription Spleen Spleen
33 chr6:71516000-71523800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr6:71516000-71528600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr6:71516200-71517400 Weak transcription Fetal Stomach stomach
36 chr6:71516200-71517800 Weak transcription Thymus Thymus
37 chr6:71516200-71520200 Weak transcription Lung lung
38 chr6:71516200-71521000 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr6:71516200-71522000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr6:71516200-71524200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr6:71516200-71534600 Weak transcription Aorta Aorta
42 chr6:71516200-71534600 Weak transcription Left Ventricle heart
43 chr6:71516200-71535000 Weak transcription Fetal Muscle Trunk muscle
44 chr6:71516200-71538400 Weak transcription Esophagus oesophagus
45 chr6:71516200-71538600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr6:71516200-71546200 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr6:71516400-71518000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr6:71516400-71518000 Weak transcription Brain Hippocampus Middle brain
49 chr6:71516400-71519200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr6:71516400-71519800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015