Variant report

Variant rs62455880
Chromosome Location chr7:5813312-5813313
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5762000-5820400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr7:5781400-5816800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr7:5784000-5819600 Weak transcription Fetal Heart heart
4 chr7:5790800-5820400 Weak transcription Placenta Amnion Placenta Amnion
5 chr7:5792600-5816600 Weak transcription Right Ventricle heart
6 chr7:5792800-5813400 Weak transcription Small Intestine intestine
7 chr7:5792800-5813600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr7:5792800-5820000 Weak transcription Fetal Kidney kidney
9 chr7:5792800-5820200 Weak transcription H1 Cell Line embryonic stem cell
10 chr7:5792800-5820200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr7:5792800-5820200 Weak transcription H9 Cell Line embryonic stem cell
12 chr7:5798800-5818800 Weak transcription Brain Germinal Matrix brain
13 chr7:5798800-5820400 Weak transcription Esophagus oesophagus
14 chr7:5799200-5814600 Weak transcription Primary B cells from cord blood blood
15 chr7:5799200-5816600 Weak transcription Fetal Brain Female brain
16 chr7:5799200-5819000 Weak transcription Fetal Brain Male brain
17 chr7:5799200-5819600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr7:5799200-5820200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr7:5799600-5820200 Weak transcription Thymus Thymus
20 chr7:5799800-5816600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr7:5800200-5818200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr7:5800400-5813400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr7:5800400-5813400 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr7:5800400-5813600 Weak transcription Primary hematopoietic stem cells blood
25 chr7:5800400-5813600 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr7:5800400-5813600 Weak transcription GM12878-XiMat blood
27 chr7:5800400-5814400 Weak transcription Fetal Thymus thymus
28 chr7:5800400-5815400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr7:5800400-5816200 Weak transcription Fetal Intestine Large intestine
30 chr7:5800400-5816600 Weak transcription Spleen Spleen
31 chr7:5800400-5816800 Weak transcription Placenta Placenta
32 chr7:5800400-5819600 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr7:5800600-5813600 Weak transcription Primary T cells from cord blood blood
34 chr7:5800600-5816600 Weak transcription Duodenum Mucosa Duodenum
35 chr7:5800600-5819000 Weak transcription Brain Substantia Nigra brain
36 chr7:5800600-5819600 Weak transcription Liver Liver
37 chr7:5800800-5813800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr7:5801000-5813400 Weak transcription Fetal Muscle Trunk muscle
39 chr7:5805400-5814600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr7:5807000-5813400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr7:5807000-5817600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr7:5807000-5820400 Weak transcription Aorta Aorta
43 chr7:5807200-5813400 Weak transcription Rectal Smooth Muscle rectum
44 chr7:5807200-5814600 Weak transcription Fetal Muscle Leg muscle
45 chr7:5807200-5816800 Weak transcription Brain Angular Gyrus brain
46 chr7:5807200-5816800 Weak transcription Brain Hippocampus Middle brain
47 chr7:5807200-5818800 Weak transcription Brain Anterior Caudate brain
48 chr7:5807400-5819600 Weak transcription Brain Inferior Temporal Lobe brain
49 chr7:5807400-5819600 Weak transcription HSMMtube muscle
50 chr7:5807600-5816800 Weak transcription iPS-20b Cell Line embryonic stem cell

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