Variant report

Variant	rs62470088
Chromosome Location	chr7:118282463-118282464
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs57332426	0.83[EUR][1000 genomes]
rs9648985	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889093	chr7:117977091-118709754	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118280400-118282800	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr7:118281600-118286800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:118281600-118286800	Weak transcription	Psoas Muscle	Psoas
4	chr7:118282400-118282800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr7:118282400-118282800	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr7:118282400-118282800	Flanking Active TSS	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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