Variant report

Variant	rs62471529
Chromosome Location	chrX:71662977-71662978
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 71 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:71)

rs_ID	r²[population]
rs10279092	0.81[ASN][1000 genomes]
rs10499768	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17139526	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17139597	1.00[AFR][1000 genomes]
rs17139644	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17146453	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1864644	0.89[ASN][1000 genomes]
rs1864645	0.89[ASN][1000 genomes]
rs3981845	1.00[AFR][1000 genomes]
rs56870556	0.83[ASN][1000 genomes]
rs56986401	0.86[ASN][1000 genomes]
rs62469465	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs62469471	0.87[AMR][1000 genomes]
rs62469473	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469475	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469478	1.00[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs62469479	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469482	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469541	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469542	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469543	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469544	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs62469552	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62469553	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62469554	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62470291	1.00[AFR][1000 genomes]
rs62470292	1.00[AFR][1000 genomes]
rs62470337	1.00[AFR][1000 genomes]
rs62470341	1.00[AFR][1000 genomes]
rs62470342	1.00[AFR][1000 genomes]
rs62470343	1.00[AFR][1000 genomes]
rs62470345	1.00[AFR][1000 genomes]
rs62470346	1.00[AFR][1000 genomes]
rs62470347	1.00[AFR][1000 genomes]
rs62470348	1.00[AFR][1000 genomes]
rs62470486	0.86[ASN][1000 genomes]
rs62470511	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62470514	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62470517	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62470530	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62471508	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62471509	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62471512	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62471514	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62471515	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62471517	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62471520	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62471533	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62471535	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62472185	1.00[AFR][1000 genomes]
rs62472187	1.00[AFR][1000 genomes]
rs62472188	1.00[AFR][1000 genomes]
rs62472189	1.00[AFR][1000 genomes]
rs62472190	1.00[AFR][1000 genomes]
rs62472192	1.00[AFR][1000 genomes]
rs62472193	1.00[AFR][1000 genomes]
rs62472195	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs62472309	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62639075	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6960171	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6960508	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6960739	0.81[ASN][1000 genomes]
rs6973980	0.81[ASN][1000 genomes]
rs6974327	0.81[ASN][1000 genomes]
rs7787828	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7804835	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7805149	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9638226	0.80[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:71617000-71707000	Weak transcription	Left Ventricle	heart
2	chrX:71642600-71683200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chrX:71645200-71681000	Weak transcription	Primary B cells from peripheral blood	blood
4	chrX:71645400-71681200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chrX:71649200-71682600	Weak transcription	Spleen	Spleen
6	chrX:71651000-71707800	Weak transcription	HUVEC	blood vessel
7	chrX:71651200-71681000	Weak transcription	Hela-S3	cervix
8	chrX:71651200-71714800	Weak transcription	Pancreas	Pancrea
9	chrX:71651600-71681600	Weak transcription	Primary T cells fromperipheralblood	blood
10	chrX:71656400-71680000	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chrX:71658000-71680000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chrX:71660800-71665600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chrX:71660800-71668400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chrX:71661000-71675800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chrX:71661200-71673000	Weak transcription	Fetal Stomach	stomach

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