Variant report

Variant	rs62482959
Chromosome Location	chr7:102739448-102739449
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:102734723..102736667-chr7:102738860..102741819,2	K562	blood:

Variant related genes	Relation type
ENSG00000170632	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv868996	chr7:102332827-102991361	ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
2	esv2752138	chr7:102358320-102787135	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
3	nsv981565	chr7:102738554-102740317	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102716400-102745400	Weak transcription	Spleen	Spleen
2	chr7:102716600-102746400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:102716600-102746600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr7:102716600-102746800	Weak transcription	Right Atrium	heart
5	chr7:102716600-102760200	Weak transcription	Lung	lung
6	chr7:102716600-102762200	Weak transcription	Colonic Mucosa	Colon
7	chr7:102716600-102768200	Weak transcription	Right Ventricle	heart
8	chr7:102716800-102753600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr7:102716800-102768400	Weak transcription	Stomach Mucosa	stomach
10	chr7:102717000-102746600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr7:102717000-102746800	Weak transcription	Fetal Heart	heart
12	chr7:102717600-102770200	Weak transcription	Small Intestine	intestine
13	chr7:102717800-102768000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
14	chr7:102719400-102769600	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr7:102723400-102746400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr7:102723600-102746400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr7:102724000-102745800	Strong transcription	Monocytes-CD14+_RO01746	blood
18	chr7:102724000-102760000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
19	chr7:102724000-102770200	Weak transcription	Psoas Muscle	Psoas
20	chr7:102725200-102770200	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr7:102725400-102753600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr7:102725600-102746400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr7:102725600-102746400	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr7:102725600-102760200	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr7:102725800-102770000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
26	chr7:102726200-102742000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
27	chr7:102727800-102753400	Weak transcription	Brain Angular Gyrus	brain
28	chr7:102727800-102768000	Weak transcription	Fetal Brain Male	brain
29	chr7:102728000-102760000	Weak transcription	Rectal Smooth Muscle	rectum
30	chr7:102728600-102753400	Weak transcription	NHDF-Ad	bronchial
31	chr7:102729800-102745800	Weak transcription	HepG2	liver
32	chr7:102730000-102744200	Weak transcription	Brain Cingulate Gyrus	brain
33	chr7:102730200-102742600	Weak transcription	NHLF	lung
34	chr7:102730200-102746400	Weak transcription	Ovary	ovary
35	chr7:102730200-102760200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
36	chr7:102730200-102769600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
37	chr7:102730400-102740800	Weak transcription	HUVEC	blood vessel
38	chr7:102730600-102740400	Weak transcription	Primary hematopoietic stem cells	blood
39	chr7:102730600-102740400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr7:102730600-102740800	Weak transcription	Brain Hippocampus Middle	brain
41	chr7:102730600-102742800	Weak transcription	Brain Anterior Caudate	brain
42	chr7:102731000-102753400	Weak transcription	Hela-S3	cervix
43	chr7:102732400-102740800	Weak transcription	Fetal Brain Female	brain
44	chr7:102732400-102741400	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr7:102732400-102744800	Weak transcription	Aorta	Aorta
46	chr7:102732400-102746000	Weak transcription	Brain Germinal Matrix	brain
47	chr7:102732400-102746000	Weak transcription	Fetal Intestine Small	intestine
48	chr7:102732400-102753800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
49	chr7:102732600-102746400	Weak transcription	Fetal Stomach	stomach
50	chr7:102732600-102753400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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