Variant report

Variant	rs62485798
Chromosome Location	chr7:140206685-140206686
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:140199959..140203037-chr7:140204634..140207948,3	K562	blood:
2	chr7:140199121..140201459-chr7:140204634..140207029,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv464734	chr7:140108096-140217670	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	nsv608500	chr7:140108096-140217670	Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	esv1803443	chr7:140146694-140263109	Flanking Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv437576	chr7:140182985-140217670	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
5	esv2761112	chr7:140191538-140234571	Strong transcription Genic enhancers Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
6	nsv1030690	chr7:140192859-140207000	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv464735	chr7:140195463-140233585	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
8	nsv608501	chr7:140195463-140233585	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
9	nsv1033685	chr7:140197079-140224303	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
10	nsv1015856	chr7:140197079-140235677	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
11	nsv1032716	chr7:140198540-140214067	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
12	nsv1018535	chr7:140198540-140224303	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers	Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
13	nsv1019815	chr7:140206590-140235677	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:140192200-140206800	Weak transcription	Right Atrium	heart
2	chr7:140202200-140206800	Weak transcription	Fetal Intestine Large	intestine
3	chr7:140202400-140206800	Weak transcription	Stomach Mucosa	stomach
4	chr7:140205200-140208000	Enhancers	Fetal Muscle Leg	muscle
5	chr7:140205800-140206800	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr7:140205800-140225400	Weak transcription	Spleen	Spleen
7	chr7:140206000-140207200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr7:140206000-140207400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr7:140206000-140207400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr7:140206000-140207400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:140206000-140208800	Enhancers	Fetal Heart	heart
12	chr7:140206200-140207000	Enhancers	HMEC	breast
13	chr7:140206200-140207200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr7:140206200-140207200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr7:140206200-140207200	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr7:140206200-140207200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr7:140206200-140207200	Flanking Active TSS	Stomach Smooth Muscle	stomach
18	chr7:140206200-140207200	Enhancers	HSMM	muscle
19	chr7:140206200-140207400	Enhancers	H1 Cell Line	embryonic stem cell
20	chr7:140206200-140207400	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr7:140206200-140207400	Enhancers	Breast Myoepithelial Primary Cells	Breast
22	chr7:140206200-140207400	Enhancers	Placenta	Placenta
23	chr7:140206200-140207400	Enhancers	Fetal Stomach	stomach
24	chr7:140206200-140207600	Enhancers	K562	blood
25	chr7:140206200-140207800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr7:140206200-140207800	Enhancers	Duodenum Smooth Muscle	Duodenum
27	chr7:140206200-140207800	Enhancers	Fetal Muscle Trunk	muscle
28	chr7:140206200-140208000	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr7:140206200-140208000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr7:140206200-140208000	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr7:140206200-140208200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr7:140206200-140208200	Enhancers	HUES6 Cell Line	embryonic stem cell
33	chr7:140206200-140208400	Enhancers	Duodenum Mucosa	Duodenum
34	chr7:140206200-140208400	Enhancers	Ovary	ovary
35	chr7:140206200-140208600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr7:140206200-140209000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr7:140206400-140206800	Enhancers	Brain Angular Gyrus	brain
38	chr7:140206400-140206800	Weak transcription	Left Ventricle	heart
39	chr7:140206400-140207000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr7:140206400-140207000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr7:140206400-140207000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr7:140206400-140207000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr7:140206400-140207000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr7:140206400-140207200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr7:140206400-140207200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr7:140206400-140207200	Enhancers	Cortex derived primary cultured neurospheres	brain
47	chr7:140206400-140207200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr7:140206400-140207200	Enhancers	Fetal Intestine Small	intestine
49	chr7:140206400-140207200	Enhancers	Rectal Mucosa Donor 29	rectum
50	chr7:140206400-140207200	Enhancers	NH-A	brain

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