Variant report

Variant	rs62503919
Chromosome Location	chr8:35129227-35129228
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017085	chr8:34742896-35594241	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv539546	chr8:34742896-35594241	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv831284	chr8:35018419-35193084	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv429910	chr8:35021411-35257445	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv3412896	chr8:35127910-35130308	Weak transcription Enhancers Active TSS	n/a	n/a	inside rSNPs	n/a
6	esv3377431	chr8:35128942-35129264	Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv3415274	chr8:35129148-35129316	Weak transcription	n/a	n/a	inside rSNPs	n/a
8	nsv396645	chr8:35129199-35129236	Weak transcription	n/a	n/a	inside rSNPs	n/a
9	esv3510169	chr8:35129217-35129276	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35096000-35135400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr8:35116200-35139200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr8:35118200-35133800	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr8:35124400-35129800	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr8:35124400-35135000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr8:35124400-35145200	Weak transcription	Fetal Brain Female	brain
7	chr8:35124600-35131800	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr8:35124600-35132000	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr8:35124600-35134600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:35124600-35134800	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr8:35124600-35134800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr8:35124600-35134800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr8:35124600-35151200	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr8:35124800-35135000	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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