Variant report

Variant	rs62514331
Chromosome Location	chr8:58637402-58637403
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs13254656	0.81[EUR][1000 genomes]
rs4266637	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533217	chr8:57991065-58789001	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv890937	chr8:58600994-58695807	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58635800-58637800	Weak transcription	Fetal Brain Male	brain
2	chr8:58637200-58637600	Active TSS	Stomach Smooth Muscle	stomach
3	chr8:58637400-58637600	Enhancers	Muscle Satellite Cultured Cells	--
4	chr8:58637400-58637600	Active TSS	HSMMtube	muscle
5	chr8:58637400-58637800	Active TSS	HSMM	muscle
6	chr8:58637400-58638000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr8:58637400-58638200	Enhancers	Fetal Kidney	kidney
8	chr8:58637400-58638200	Enhancers	Fetal Stomach	stomach
9	chr8:58637400-58638800	Enhancers	Primary T cells from cord blood	blood
10	chr8:58637400-58639400	Enhancers	Dnd41	blood
11	chr8:58637400-58639600	Enhancers	Fetal Thymus	thymus

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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