Variant report

Variant	rs62514484
Chromosome Location	chr8:108498355-108498356
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs62513160	1.00[AMR][1000 genomes]
rs62514487	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1825819	chr8:108495057-108506185	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv1832361	chr8:108495057-108506185	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1844679	chr8:108495057-108506185	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108493000-108498400	Weak transcription	NHDF-Ad	bronchial
2	chr8:108494800-108502000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr8:108496600-108499600	Enhancers	Ovary	ovary
4	chr8:108496800-108499000	Enhancers	Adipose Nuclei	Adipose
5	chr8:108496800-108499400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr8:108496800-108499400	Enhancers	Psoas Muscle	Psoas
7	chr8:108497000-108501200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr8:108497000-108503600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr8:108497200-108499400	Enhancers	Fetal Kidney	kidney
10	chr8:108497200-108499800	Enhancers	Fetal Lung	lung
11	chr8:108497400-108498400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr8:108497400-108498400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:108497400-108498600	Enhancers	Fetal Stomach	stomach
14	chr8:108497400-108498600	Flanking Active TSS	HUVEC	blood vessel
15	chr8:108497400-108498600	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr8:108497400-108498800	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr8:108497400-108499000	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr8:108497400-108499000	Enhancers	iPS-20b Cell Line	embryonic stem cell
19	chr8:108497400-108499400	Enhancers	H1 Cell Line	embryonic stem cell
20	chr8:108497400-108499400	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
21	chr8:108497400-108499400	Enhancers	Fetal Heart	heart
22	chr8:108497400-108499600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr8:108497400-108499600	Enhancers	H9 Cell Line	embryonic stem cell
24	chr8:108497600-108498400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr8:108497600-108498400	Flanking Active TSS	Primary hematopoietic stem cells	blood
26	chr8:108497600-108498400	Active TSS	Brain Anterior Caudate	brain
27	chr8:108497600-108498600	Enhancers	Primary monocytes fromperipheralblood	blood
28	chr8:108497600-108498800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr8:108497600-108498800	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr8:108497600-108498800	Weak transcription	Spleen	Spleen
31	chr8:108497600-108499200	Weak transcription	Right Atrium	heart
32	chr8:108497600-108499400	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr8:108497600-108499600	Enhancers	Fetal Thymus	thymus
34	chr8:108497600-108500000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr8:108497600-108504200	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr8:108497800-108498400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr8:108497800-108498400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr8:108497800-108498400	Enhancers	Muscle Satellite Cultured Cells	--
39	chr8:108497800-108498400	Flanking Active TSS	NHLF	lung
40	chr8:108497800-108498600	Enhancers	Fetal Intestine Small	intestine
41	chr8:108497800-108499800	Enhancers	Cortex derived primary cultured neurospheres	brain
42	chr8:108497800-108500200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr8:108497800-108503600	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr8:108497800-108508400	Weak transcription	Left Ventricle	heart
45	chr8:108498000-108498400	Flanking Active TSS	Aorta	Aorta
46	chr8:108498000-108498400	Flanking Active TSS	Osteobl	bone
47	chr8:108498000-108500000	Enhancers	iPS-15b Cell Line	embryonic stem cell
48	chr8:108498200-108498400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr8:108498200-108498400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr8:108498200-108498400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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