Variant report

Variant	rs62572398
Chromosome Location	chr6:143665376-143665377
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:143576278..143579011-chr6:143664006..143666118,2	K562	blood:
2	chr6:143663921..143666582-chr6:143668442..143671161,2	K562	blood:
3	chr6:143665025..143666582-chr6:143668442..143670417,2	K562	blood:

rs_ID	r²[population]
rs10761181	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10821036	0.83[AMR][1000 genomes]
rs10821037	0.83[AMR][1000 genomes]
rs10992512	0.84[AMR][1000 genomes]
rs10992513	0.83[AMR][1000 genomes]
rs11792027	0.83[AMR][1000 genomes]
rs12003227	0.83[AMR][1000 genomes]
rs12685086	0.82[AMR][1000 genomes]
rs16905839	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1966189	0.82[AMR][1000 genomes]
rs1980698	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2281715	0.82[AMR][1000 genomes]
rs4076630	0.82[AMR][1000 genomes]
rs7044372	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
3	chr6:143653000-143665600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr6:143654000-143672000	Weak transcription	Ovary	ovary
5	chr6:143654400-143667800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:143655200-143665800	Weak transcription	Fetal Intestine Large	intestine
7	chr6:143655400-143666000	Weak transcription	Brain Hippocampus Middle	brain
8	chr6:143655600-143667200	Weak transcription	Adipose Nuclei	Adipose
9	chr6:143658200-143667200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr6:143658400-143670200	Weak transcription	NHDF-Ad	bronchial
11	chr6:143658600-143667200	Weak transcription	NH-A	brain
12	chr6:143658800-143669400	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr6:143659400-143668400	Weak transcription	Fetal Intestine Small	intestine
14	chr6:143660800-143667200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr6:143661000-143667200	Weak transcription	Osteobl	bone
16	chr6:143661000-143669400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr6:143661400-143667200	Weak transcription	HMEC	breast
18	chr6:143662800-143665400	Weak transcription	Stomach Smooth Muscle	stomach
19	chr6:143662800-143675600	Weak transcription	Liver	Liver
20	chr6:143663000-143667200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr6:143663000-143670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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