Variant report

Variant rs6426098
Chromosome Location chr1:226244707-226244708
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226222600-226248600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr1:226226000-226248000 Weak transcription Left Ventricle heart
3 chr1:226229600-226248200 Weak transcription Brain Germinal Matrix brain
4 chr1:226229800-226249400 Weak transcription Spleen Spleen
5 chr1:226230000-226249200 Weak transcription Aorta Aorta
6 chr1:226231200-226249200 Weak transcription Pancreas Pancrea
7 chr1:226232000-226249200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:226232200-226249400 Weak transcription Gastric stomach
9 chr1:226232600-226248600 Weak transcription Brain Substantia Nigra brain
10 chr1:226234600-226248000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:226234600-226248800 Weak transcription HSMM muscle
12 chr1:226234800-226248800 Weak transcription HSMMtube muscle
13 chr1:226235000-226248200 Weak transcription Fetal Intestine Large intestine
14 chr1:226235000-226248800 Weak transcription Colonic Mucosa Colon
15 chr1:226235200-226246200 Weak transcription Fetal Lung lung
16 chr1:226235200-226248600 Weak transcription HepG2 liver
17 chr1:226235200-226249200 Weak transcription Small Intestine intestine
18 chr1:226235400-226248000 Weak transcription Duodenum Mucosa Duodenum
19 chr1:226235400-226248600 Weak transcription Brain Hippocampus Middle brain
20 chr1:226235400-226249200 Weak transcription Esophagus oesophagus
21 chr1:226235600-226248200 Weak transcription Fetal Intestine Small intestine
22 chr1:226235800-226246200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:226235800-226248200 Weak transcription Stomach Mucosa stomach
24 chr1:226236200-226248200 Weak transcription Colon Smooth Muscle Colon
25 chr1:226236200-226248600 Weak transcription Fetal Brain Male brain
26 chr1:226236800-226248200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:226236800-226248600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:226237000-226246200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:226237200-226248600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:226237600-226246000 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr1:226237600-226248800 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:226238400-226248200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:226238600-226249000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:226240000-226248400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:226240800-226247800 Weak transcription Psoas Muscle Psoas
36 chr1:226241000-226249200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:226241200-226248200 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:226241600-226246600 Strong transcription Fetal Thymus thymus
39 chr1:226242400-226248200 Weak transcription Fetal Heart heart
40 chr1:226242400-226248400 Weak transcription Stomach Smooth Muscle stomach
41 chr1:226242400-226249200 Weak transcription Lung lung
42 chr1:226242600-226248600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:226242600-226248600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr1:226242600-226248800 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:226242800-226245200 Weak transcription Fetal Stomach stomach
46 chr1:226242800-226246000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:226242800-226246200 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr1:226242800-226246400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:226242800-226246600 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr1:226242800-226248200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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