Variant report

Variant rs6426271
Chromosome Location chr1:246228225-246228226
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246203800-246257600 Weak transcription Primary T cells from cord blood blood
2 chr1:246211200-246229400 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr1:246224600-246230800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:246226200-246230600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:246226400-246230000 Weak transcription Primary hematopoietic stem cells blood
6 chr1:246226600-246231000 Weak transcription K562 blood
7 chr1:246227400-246229400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:246227400-246229800 Enhancers HUES48 Cell Line embryonic stem cell
9 chr1:246227400-246230800 Weak transcription Ovary ovary
10 chr1:246227600-246228400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:246227600-246229000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:246227600-246229600 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
13 chr1:246227800-246229200 Enhancers HepG2 liver
14 chr1:246227800-246230600 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:246227800-246231400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:246227800-246232200 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr1:246228000-246228400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:246228000-246231200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:246228000-246232000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr1:246228200-246228400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:246228200-246228600 Weak transcription H1 Cell Line embryonic stem cell
22 chr1:246228200-246228600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:246228200-246229200 Enhancers iPS-20b Cell Line embryonic stem cell
24 chr1:246228200-246229400 Enhancers HUES6 Cell Line embryonic stem cell

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