Variant report
Variant | rs6429553 |
---|---|
Chromosome Location | chr1:45480733-45480734 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:45478400-45483200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
2 | chr1:45478600-45482600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
3 | chr1:45478600-45500000 | Weak transcription | Aorta | Aorta |
4 | chr1:45478800-45481400 | Transcr. at gene 5' and 3' | K562 | blood |
5 | chr1:45478800-45482200 | Weak transcription | Psoas Muscle | Psoas |
6 | chr1:45478800-45482600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
7 | chr1:45478800-45484000 | Weak transcription | Right Atrium | heart |
8 | chr1:45479000-45480800 | Genic enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
9 | chr1:45479000-45480800 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
10 | chr1:45479000-45480800 | Genic enhancers | Fetal Muscle Trunk | muscle |
11 | chr1:45479000-45480800 | Genic enhancers | Fetal Muscle Leg | muscle |
12 | chr1:45479000-45480800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
13 | chr1:45479000-45480800 | Genic enhancers | Stomach Smooth Muscle | stomach |
14 | chr1:45479000-45480800 | Genic enhancers | NH-A | brain |
15 | chr1:45479000-45482800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
16 | chr1:45479000-45483400 | Weak transcription | Primary B cells from cord blood | blood |
17 | chr1:45479000-45484200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
18 | chr1:45479000-45484200 | Weak transcription | Esophagus | oesophagus |
19 | chr1:45479000-45485200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
20 | chr1:45479000-45493000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
21 | chr1:45479200-45480800 | Genic enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
22 | chr1:45479200-45480800 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
23 | chr1:45479200-45480800 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
24 | chr1:45479200-45480800 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin02 | Skin |
25 | chr1:45479200-45480800 | Genic enhancers | Ovary | ovary |
26 | chr1:45479200-45480800 | Genic enhancers | Skeletal Muscle Male | skeletal muscle |
27 | chr1:45479200-45480800 | Genic enhancers | Dnd41 | blood |
28 | chr1:45479200-45480800 | Genic enhancers | HUVEC | blood vessel |
29 | chr1:45479200-45481200 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
30 | chr1:45479200-45482000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
31 | chr1:45479200-45484200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
32 | chr1:45479400-45480800 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
33 | chr1:45479400-45480800 | Genic enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
34 | chr1:45479400-45480800 | Genic enhancers | Muscle Satellite Cultured Cells | -- |
35 | chr1:45479400-45481000 | Genic enhancers | Skeletal Muscle Female | skeletal muscle |
36 | chr1:45479400-45481200 | Strong transcription | Thymus | Thymus |
37 | chr1:45479400-45481600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
38 | chr1:45479400-45481600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
39 | chr1:45479400-45481600 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
40 | chr1:45479400-45481600 | Strong transcription | NHEK | skin |
41 | chr1:45479400-45482000 | Strong transcription | Fetal Lung | lung |
42 | chr1:45479400-45484200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
43 | chr1:45479600-45480800 | Genic enhancers | Cortex derived primary cultured neurospheres | brain |
44 | chr1:45479600-45481200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
45 | chr1:45479600-45481200 | Strong transcription | Colonic Mucosa | Colon |
46 | chr1:45479600-45481400 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
47 | chr1:45479600-45481400 | Strong transcription | NHLF | lung |
48 | chr1:45479600-45481600 | Strong transcription | Placenta | Placenta |
49 | chr1:45479600-45481600 | Strong transcription | Fetal Stomach | stomach |
50 | chr1:45479600-45481800 | Strong transcription | Primary T cells from cord blood | blood |