The 2.0 version of rSNPBase

Variant report

Variant rs6439422
Chromosome Location chr3:133264577-133264578
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:133257000-133265600 Weak transcription Ovary ovary
2 chr3:133260200-133268000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr3:133260400-133265400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr3:133260400-133265600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr3:133260400-133265600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr3:133260400-133265600 Weak transcription Adipose Nuclei Adipose
7 chr3:133260400-133265600 Weak transcription A549 lung
8 chr3:133260400-133265600 Weak transcription HSMMtube muscle
9 chr3:133260400-133265800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr3:133260400-133265800 Weak transcription Fetal Muscle Leg muscle
11 chr3:133260400-133265800 Weak transcription Lung lung
12 chr3:133260400-133266200 Weak transcription Esophagus oesophagus
13 chr3:133260600-133265400 Weak transcription HSMM muscle
14 chr3:133260600-133265600 Weak transcription Muscle Satellite Cultured Cells --
15 chr3:133260600-133265600 Weak transcription NHLF lung
16 chr3:133260600-133265600 Weak transcription Osteobl bone
17 chr3:133260600-133265800 Weak transcription Stomach Mucosa stomach
18 chr3:133260600-133265800 Weak transcription NH-A brain
19 chr3:133260600-133266000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:133260600-133266000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr3:133260600-133266000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr3:133260600-133266000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr3:133260600-133266000 Weak transcription HMEC breast
24 chr3:133260800-133265600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr3:133261800-133265800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:133262200-133265600 Weak transcription NHDF-Ad bronchial
27 chr3:133262200-133266000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr3:133262600-133266000 Weak transcription Fetal Lung lung
29 chr3:133263400-133265000 Enhancers HepG2 liver
30 chr3:133263400-133267400 Enhancers Liver Liver
31 chr3:133264000-133264600 Enhancers GM12878-XiMat blood
32 chr3:133264000-133267200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr3:133264200-133264600 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015