Variant report

Variant	rs6440203
Chromosome Location	chr3:143617326-143617327
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:143615673..143619664-chr3:143688738..143692430,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000181744	Chromatin interaction

rs_ID	r²[population]
rs6440204	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:143615000-143617600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr3:143616200-143617600	Enhancers	NHDF-Ad	bronchial
3	chr3:143616200-143618000	Enhancers	NHLF	lung
4	chr3:143616400-143617400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr3:143616400-143617400	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr3:143616400-143617400	Enhancers	Stomach Mucosa	stomach
7	chr3:143616400-143617600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr3:143616400-143617600	Enhancers	Brain Angular Gyrus	brain
9	chr3:143616400-143617600	Enhancers	Fetal Lung	lung
10	chr3:143616600-143617600	Enhancers	Fetal Intestine Large	intestine
11	chr3:143616600-143617800	Enhancers	Ovary	ovary
12	chr3:143616800-143617400	Enhancers	Fetal Brain Male	brain
13	chr3:143616800-143617800	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr3:143616800-143617800	Enhancers	Fetal Brain Female	brain
15	chr3:143616800-143618000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr3:143616800-143619600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr3:143617000-143617600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr3:143617000-143617600	Enhancers	Brain Hippocampus Middle	brain
19	chr3:143617000-143617600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr3:143617000-143618600	Weak transcription	HMEC	breast
21	chr3:143617000-143618800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr3:143617000-143619000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr3:143617000-143619600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr3:143617000-143619600	Weak transcription	NH-A	brain
25	chr3:143617200-143617400	Enhancers	Brain Anterior Caudate	brain
26	chr3:143617200-143617400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
27	chr3:143617200-143619200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr3:143617200-143619600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr3:143617200-143619600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr3:143617200-143619600	Weak transcription	HSMM	muscle
31	chr3:143617200-143619600	Weak transcription	NHEK	skin
32	chr3:143617200-143619600	Weak transcription	Osteobl	bone

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