The 2.0 version of rSNPBase

Variant report

Variant rs6441243
Chromosome Location chr3:100115651-100115652
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100090200-100118400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:100091600-100117600 Weak transcription Placenta Amnion Placenta Amnion
3 chr3:100099000-100118600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:100099800-100117600 Weak transcription Colonic Mucosa Colon
5 chr3:100102800-100118200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr3:100103800-100117600 Weak transcription Fetal Kidney kidney
7 chr3:100103800-100118600 Weak transcription Brain Substantia Nigra brain
8 chr3:100104000-100117600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr3:100104200-100117600 Weak transcription Brain Angular Gyrus brain
10 chr3:100104200-100117600 Weak transcription Brain Cingulate Gyrus brain
11 chr3:100104200-100117600 Weak transcription Psoas Muscle Psoas
12 chr3:100104200-100117600 Weak transcription Thymus Thymus
13 chr3:100104200-100117800 Weak transcription Esophagus oesophagus
14 chr3:100104200-100118200 Weak transcription HSMMtube muscle
15 chr3:100104200-100118600 Weak transcription H9 Cell Line embryonic stem cell
16 chr3:100104200-100118600 Weak transcription Aorta Aorta
17 chr3:100104400-100117200 Weak transcription NHEK skin
18 chr3:100104600-100117600 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr3:100104600-100117600 Weak transcription Fetal Brain Male brain
20 chr3:100104600-100118600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr3:100104800-100117400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:100105000-100115800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr3:100105200-100117600 Weak transcription Rectal Smooth Muscle rectum
24 chr3:100105200-100118400 Weak transcription H1 Cell Line embryonic stem cell
25 chr3:100105200-100118600 Weak transcription Placenta Placenta
26 chr3:100105800-100118200 Weak transcription HMEC breast
27 chr3:100106000-100117600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr3:100106000-100117800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr3:100106200-100117400 Weak transcription Osteobl bone
30 chr3:100106200-100117800 Weak transcription NH-A brain
31 chr3:100106200-100118200 Weak transcription HUVEC blood vessel
32 chr3:100106400-100115800 Weak transcription Muscle Satellite Cultured Cells --
33 chr3:100106400-100116800 Weak transcription Left Ventricle heart
34 chr3:100106400-100117400 Weak transcription Fetal Heart heart
35 chr3:100106400-100117800 Weak transcription Lung lung
36 chr3:100106400-100117800 Weak transcription Ovary ovary
37 chr3:100106400-100118200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr3:100106600-100117800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr3:100107400-100117000 Weak transcription Pancreas Pancrea
40 chr3:100108200-100116800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr3:100108200-100117400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr3:100108200-100117600 Weak transcription Fetal Lung lung
43 chr3:100108400-100116800 Weak transcription Adipose Nuclei Adipose
44 chr3:100108400-100118200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr3:100108400-100118200 Weak transcription Primary B cells from peripheral blood blood
46 chr3:100108600-100116800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr3:100108600-100118400 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr3:100108800-100117600 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr3:100109200-100117400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr3:100109200-100117600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015