Variant report

Variant rs6458848
Chromosome Location chr6:13474062-13474063
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13452200-13483400 Weak transcription Gastric stomach
2 chr6:13454400-13485000 Weak transcription Colonic Mucosa Colon
3 chr6:13455200-13484400 Weak transcription Small Intestine intestine
4 chr6:13455200-13484600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr6:13455400-13481000 Weak transcription HUVEC blood vessel
6 chr6:13462800-13484800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr6:13463200-13481000 Weak transcription A549 lung
8 chr6:13463400-13476600 Weak transcription Placenta Amnion Placenta Amnion
9 chr6:13463600-13484400 Weak transcription Primary T cells from cord blood blood
10 chr6:13463800-13484600 Weak transcription Duodenum Mucosa Duodenum
11 chr6:13464600-13476400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:13465200-13485000 Weak transcription Rectal Smooth Muscle rectum
13 chr6:13466800-13474200 Weak transcription Hela-S3 cervix
14 chr6:13467000-13478600 Weak transcription Thymus Thymus
15 chr6:13467800-13474800 Weak transcription Colon Smooth Muscle Colon
16 chr6:13468200-13474600 Weak transcription Liver Liver
17 chr6:13468200-13477000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr6:13469200-13480000 Weak transcription Aorta Aorta
19 chr6:13469400-13485800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:13470000-13474200 Enhancers Right Atrium heart
21 chr6:13470400-13474600 Enhancers Right Ventricle heart
22 chr6:13470600-13474800 Weak transcription HMEC breast
23 chr6:13470800-13474800 Enhancers Spleen Spleen
24 chr6:13470800-13477400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr6:13470800-13478800 Weak transcription NHLF lung
26 chr6:13470800-13480200 Weak transcription NH-A brain
27 chr6:13470800-13483600 Weak transcription Fetal Stomach stomach
28 chr6:13471000-13475600 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr6:13471000-13485400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr6:13471000-13485600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr6:13471200-13474800 Weak transcription Adipose Nuclei Adipose
32 chr6:13471200-13478800 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr6:13471200-13483400 Weak transcription H9 Cell Line embryonic stem cell
34 chr6:13471200-13483400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr6:13471400-13478600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr6:13471400-13478600 Weak transcription Dnd41 blood
37 chr6:13471400-13480400 Weak transcription Fetal Lung lung
38 chr6:13471400-13484200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:13471600-13474800 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr6:13471600-13477200 Weak transcription Pancreas Pancrea
41 chr6:13471600-13480200 Weak transcription Brain Cingulate Gyrus brain
42 chr6:13471600-13481600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr6:13471600-13483600 Weak transcription Fetal Muscle Leg muscle
44 chr6:13471600-13485000 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr6:13471800-13474200 Weak transcription Fetal Brain Female brain
46 chr6:13471800-13478800 Weak transcription H1 Cell Line embryonic stem cell
47 chr6:13471800-13480200 Weak transcription Fetal Brain Male brain
48 chr6:13471800-13485600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr6:13472000-13475200 Enhancers K562 blood
50 chr6:13472000-13481800 Weak transcription Brain Germinal Matrix brain

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