Variant report

Variant rs6459020
Chromosome Location chr6:13680064-13680065
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13620600-13691000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr6:13654600-13689800 Weak transcription Osteobl bone
3 chr6:13657000-13680200 Weak transcription HSMM muscle
4 chr6:13660800-13688000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr6:13665600-13695200 Weak transcription NHLF lung
6 chr6:13667600-13695800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr6:13668200-13694600 Weak transcription NHDF-Ad bronchial
8 chr6:13668600-13684200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:13668800-13694800 Weak transcription Muscle Satellite Cultured Cells --
10 chr6:13670000-13701600 Weak transcription Esophagus oesophagus
11 chr6:13670600-13680800 Weak transcription Fetal Thymus thymus
12 chr6:13672400-13688200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr6:13673000-13680800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:13673400-13695800 Weak transcription Brain Angular Gyrus brain
15 chr6:13674400-13680600 Weak transcription Fetal Stomach stomach
16 chr6:13675200-13680800 Weak transcription H1 Cell Line embryonic stem cell
17 chr6:13675200-13689600 Weak transcription Aorta Aorta
18 chr6:13675400-13681000 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr6:13677400-13688800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:13677400-13693200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr6:13677600-13681000 Weak transcription Primary T cells from cord blood blood
22 chr6:13677800-13699200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:13678000-13681400 Strong transcription Dnd41 blood
24 chr6:13678000-13687200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr6:13678200-13680200 Weak transcription Primary B cells from cord blood blood
26 chr6:13678200-13681400 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr6:13678200-13681600 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr6:13678200-13692400 Enhancers Primary T helper cells fromperipheralblood blood
29 chr6:13678400-13680200 Active TSS K562 blood
30 chr6:13678400-13681200 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr6:13678400-13681600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr6:13678800-13680600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:13678800-13681000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr6:13678800-13681400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr6:13678800-13681400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr6:13678800-13688800 Weak transcription Fetal Muscle Leg muscle
37 chr6:13679000-13680400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr6:13679000-13680600 Weak transcription Primary T cells fromperipheralblood blood
39 chr6:13679000-13680600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr6:13679000-13680600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr6:13679000-13680800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr6:13679000-13680800 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr6:13679000-13681000 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr6:13679000-13686600 Weak transcription Ovary ovary
45 chr6:13679000-13686800 Weak transcription Psoas Muscle Psoas
46 chr6:13679000-13688200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr6:13679000-13688200 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr6:13679000-13690000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr6:13679000-13690000 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr6:13679000-13691000 Weak transcription Left Ventricle heart

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